Oncorhynchus tshawytscha (Chinook salmon): 112217531
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Entry
112217531 CDS
T05605
Symbol
traf3ip2a
Name
(RefSeq) E3 ubiquitin ligase TRAF3IP2
KO
K21124
adaptor protein CIKS
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112217531 (traf3ip2a)
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Gene cluster
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Motif
Pfam:
SEFIR
LCE
TIR_2
Motif
Other DBs
NCBI-GeneID:
112217531
NCBI-ProteinID:
XP_024233631
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Position
LG18:13629727..13635498
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AA seq
458 aa
AA seq
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MDSFTDSRRHRSIPVETDESMTSSTLNLALPLDCGQCSEHRKRPKEEAWFSPEVTVNDVG
QVEYPKDSWRTSTEDPLGNLRPQFRTPSLHQKDMFPHTPDPVDLRLHSYRERAQWTEDFS
FSEILRRGAEGFPGPPSWPLPQDCNLERAEHLESPLSLRSDLNDIHCVPPRYPPHTPPRC
PDQVHGRCSRLYTCQKPVNQTCPLYNHHHYNHLHPTEHQRELQQDPPSWTHTAQNRLYGQ
GALKAPSRNLPQRVAPPREVMSEVSVVPSYPVSPGQPGGGGTATQEQRKTISLPEECRNV
FITYSVDTAREMFTFVKFLIDQGFKPAIDIFDNPVRRMDINKWMDTYLKDKSVLIIVAIS
PKYKADVEGYGEDEHGLHTKYIHTQIQNEFIQQHCLNFRLVPVLFPTATKRHVPAWLQST
RIYRWPQDTQDLVLRLLREERYIAPSLGKEMTLSIRPL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggactctttcacagattcccgtcgtcacagaagtattccggtggagacagatgagtca
atgacatcatcaacgctgaacctagcattgcccttggactgtgggcagtgctcagaacac
agaaagaggccaaaggaagaggcctggttttcccctgaggtgaccgtcaacgacgtaggc
caggtggaataccccaaggactcctggagaacctctacggaagaccctctgggtaacctt
cgaccccagttcagaaccccctccctgcatcagaaagacatgttcccacacacccctgac
cctgtcgacctcaggttacactcctacagagagagggctcagtggactgaggatttctct
ttctctgagattctccggcggggagcggagggcttccctggtcctcccagctggcctcta
cctcaggactgtaaccttgaaagagcagaacacttggagtcccctctttctctcaggtct
gacttaaatgacatccactgtgtccctccgagatacccaccacacacgcctcctcgatgc
cctgatcaagtgcacggcaggtgttcgagactgtacacatgtcagaaacccgtaaatcaa
acctgtcccctctataatcatcatcattataaccatcttcaccctacggaacatcagcgg
gagcttcagcaagacccgccatcctggactcacacggctcaaaacagactatatggacaa
ggagctctaaaagcccccagccggaatcttcctcagcgtgtggcccctcccagagaggtg
atgtctgaggtcagtgtggtgccctcttacccagtgtcccccggccaaccaggtggggga
ggaacagctacacaggaacagaggaagaccatcagtttacccgaggagtgcaggaatgtt
tttattacgtattctgtggacacagccagagagatgtttaccttcgtgaagtttctgata
gatcagggctttaaaccagctattgacatttttgataatccagtcagaagaatggacatc
aacaagtggatggacacctatttaaaggataagtcagtgctgatcatcgtggccatcagt
cctaagtacaaggcagacgtggagggatacggggaggatgagcatggtctccacaccaag
tacattcatactcagatccagaatgagttcatccaacagcactgccttaatttccgactg
gtgcccgtattatttcccactgctaccaagagacatgtccccgcttggctccagagtacc
aggatctaccgctggccccaggatacccaagacttggttctccgtttgctaagagaggaa
cgctacatcgccccctctctggggaaagagatgaccctctctattcggcccctctga
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