Oncorhynchus tshawytscha (Chinook salmon): 112219996
Help
Entry
112219996 CDS
T05605
Symbol
tln1
Name
(RefSeq) talin-1 isoform X1
KO
K06271
talin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112219996 (tln1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112219996 (tln1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112219996 (tln1)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112219996 (tln1)
Exosomal proteins of other cancer cells
112219996 (tln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
Talin_VBS2
I_LWEQ
Talin_middle
VBS
Talin_R4
FERM_f0
IRS
FERM_M
FERM_N
RA_2
ACBP
PH_SLA1
DUF7783
TrcR
Motif
Other DBs
NCBI-GeneID:
112219996
NCBI-ProteinID:
XP_042158619
LinkDB
All DBs
Position
LG20:41546317..41688617
Genome browser
AA seq
2543 aa
AA seq
DB search
MVALSLKIGVGNVVKTMQFEPSTMVYDACRMIRERVPEAQLGQPNDYGLFLSDEDPKKGI
WLEAGKALDYYMLRNGDTLEYKKKQRPLKIRMLDGTVKTVMVDDSKIVSDMLMTICARIG
ITNYDEYSLVHDMVEEKKEEMTGTLTRRDKTLMRDDKKMEKLKQKLHTDDELNWLDHGRT
LREQGVEETEMLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACDFA
GYQCQIQFGDHNETKHKPGFLDLKEFLPKEYIKNKGEKRIFQAHKNYQNMTEIEAKVSYV
KLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWNLTNIKRW
AASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTM
LEDSVSPKKSTVLQQQFNKVGKVETGSVALPAIMRSGAGGPESFQMGSMPQAKQHITSGQ
MHRGHMPPLTSAQQALTGTINSSMQALQAAQASLEEFDTLPPLGTDAASQAWRKNKMDES
KHEIHSQVDAITAGTASMVNLTAGDPAETDYTAVGCAVTTISSNLTEMSKGVKLLAALME
DEGGNGNQLLGAAKNLACAVSDMLKTAQPANTEPRQNLLQAAGNVGQASGELLSHIGETD
ADPRFQDMLMQLAKAVANAAAALVLKAKNVAQKTEDSALQNRVIAAATQCALSTSQLVAC
TRVVAPTISSPVCQEQLIEAGKLVAKSVDGCVDASQGATSDEGLLKQVGAAATGVTHALN
ELLQHIKQYAHGGQPIGRHGEATDRILDVTENIFSSMGDAGEMVRQARILAQATSDLVNA
IKMDAEGESDLENSRKLLSAAKLLADATAKMVEAAKGAAANPDSEEQQQRLREAAEGLRM
ATNAAAQNAIKKRLVNKLENAAKQAAAAATQTIAAAQHAASSNKNPAAQQQLVQSCKVVA
DQIPQLVQGVRGSQSQPDSPSAQLTLIGAGQNFLLPGAKMVTAAKATVPTIGDQASAMQL
SQCAKNLATALAELRTAAQKAQEACGPLEIDNALTVVRGLEKDMVEAKASAGDGKLKPLP
GETLEKCSQDVGNSTKAVSSAIAQLLSEATQGNENYTGMAARDVAQALRALASAARGVAA
TTADPQARNAMLDCAGDVMDKSANLIEETKRAIAKPGDPDSQQRLAQVAKAVSQALNRSV
NCLPGQRDVDNAIRTVGEASKKLLANSFPPSGKSFQEAQVNLNQAAAGLNQSANELVQSS
RGTTQDLAKATGKFGHDFGEFLDAGVDMAGQSQNKENQTQVVSNLKTISMSSSKLLLAAK
VLSTDPNSPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELETVRGLLENP
TEAVSDLSYFDCIDSVMENSKVLGEAMAGISHNAKNSNLPEFGDSVSSGSKALCGLTEAA
AQGAYLVGVSDPKSHAGQKGLVDPGQFARANQSIQMACQNLVDPACTQSQVLSAATIVAK
HTSALCNACRLASSKTANPVAKRQFVQSAKEVANSTANLVKSIKALDGAFNQQNREKCRV
ATGPLIEAVDNLTAFASNPEFASVPAQISAEGLAAMEPIVVAAKTMLESSTGLIQTARSL
AVNPKDPPKWSVLAGHSRTVSDSIKKLITNMRDKAPGQRECDEAIEVLNNCIREVDQASL
AAISQQLTPREDISQEALHEQLAASVQEISNLIEPVAIAARSEASHLGHKVSQMVSYFEP
LIMAAIGTASKIQSSQQQMAVLDQTKTLTESALQMLYTAKEAGGNPKAAHTQEALEESVQ
MMKEAVDDLGATLSETASAAGALGGMVDSITAAINKMEESPAGEPDGSFVDYQTTMVKTA
KAIAVTVQEMVTKSNTNPDDLGGLASELTNEFGELATEAKYAAITAENDEIGSHIKKQVG
ELGFNCTGLVTKAGALQCSPNDSFTKKELIDSARKVSEKVSHVLAALQAGNRGTQACITA
ASTVSGIIADLDTTIMFATAGTLNRENSETFADHREHILKTAKALVEDTKLLVSGAGASQ
ERLAQAAQSSVITITKLADVVKLGAASLGAEDPETQVVLINAVKDVAKALSDLISATKAA
AGKPHDDPAMLQLKNSAKVMVTNVTSLLKTVKAVEDEATKGTRGLEATIEHIKQELAVFS
NGDPPPKTSTPEDFIRMTKGITQATAKAVAAGNSCRQEDVIATANLSRRAIADMLHSCKQ
AAYHPEVSKEVQNRALRYGNECALGYLGLLEHVLVPIIQKPSHELKQQLANYSKRVAGSV
TELIQAAEAMKGTEWVDPEDPTVIAENELLGAAAAIEAAARKLELLRPRTKPKEADESLN
FEEQILEAAKSIAAATSALVKAASAAQRELVAQGKVGACPANAVDDGQWSQGLISAARMV
AAATSNLCEAANSAVQGHASEEKLVSSAKQVSASTAQLLVACKVKADQDSQTMKRLQAAG
NAVKRASDSLVKAAQKAAFDAQDEQAVVVKSKMVGGIAQIIAAQEEMLRKERELDEARKK
LATIRQQQYKFLPSELREDGQEQ
NT seq
7632 nt
NT seq
+upstream
nt +downstream
nt
atggtggccctgtcactgaagattggcgtggggaacgtggtgaagaccatgcagtttgag
ccctccaccatggtgtacgacgcctgtcgaatgatcagggaaagagttcccgaggcacag
ctgggccagcccaatgactatggtctgttcctgtccgatgaggaccccaagaaaggcatc
tggctggaggcaggcaaggccctggactactacatgctgaggaatggggacactctggag
tacaagaagaagcagaggcccttgaagatccgcatgctggacgggacagtgaaaaccgtc
atggtggacgactccaagatcgtcagcgacatgcttatgaccatctgtgccaggataggt
atcacaaactatgacgagtactcgttggtgcacgacatggttgaggagaagaaggaggag
atgacggggactctgacaagacgggacaagactctgatgagagacgacaagaagatggag
aaacttaagcagaaactccacacagatgacgagttgaactggctggaccatgggcggacg
ctgagggagcagggtgtggaggagaccgagatgctgctcctcaggaggaagttcttctac
tcagaccagaacgtggactcacgagacccggtccagctcaacctgctctacgtccaggcc
cgtgatgacattttgaacggctcccatcccgtctccttcgagaaggcctgcgactttgct
gggtaccagtgtcagatccagtttggtgaccacaacgagaccaagcacaaaccaggcttt
ctagatttgaaagagttcctccctaaagagtacatcaagaacaaaggagagaaaagaatc
ttccaggcacacaaaaactaccaaaacatgactgaaatcgaggccaaagtcagctacgtc
aaactggctaggtctctgaaaacctacggagtgtccttcttcctagtaaaggagaaaatg
aagggtaagaacaagctggtccctcgtcttctgggaatcaccaaggagtgtgtcatgcgg
gtagacgagaagaccaaggaggtgatccaggagtggaacctcaccaacatcaaacgctgg
gctgcctcgcccaagagcttcaccctggactttggcgattatcaagacggttactactct
gtccagacgactgagggagagcagatcgcccaactgatcgctggttacattgacatcatt
ctgaaaaagaaaaagagcaaggaccactttggcttagagggagatgaggagtccaccatg
ttggaggattctgtgtcacccaaaaagtctacagtgctgcagcagcagttcaacaaggtg
gggaaggtggagactggctctgtggccctgccagccatcatgcgttcaggggccgggggc
cccgagagcttccagatgggctccatgcctcaggccaagcagcacatcaccagcggacag
atgcacaggggccacatgcccccgctgacatcagcccagcaggccctgactggcaccatc
aactccagcatgcaggcgttgcaggctgcccaggcctcgctggaggagtttgacaccctg
cctcccctcgggacagacgcggcctcccaagcctggcgtaagaacaagatggacgagtcc
aaacacgagatccactcccaggttgacgccatcacagccgggacggcctctatggtcaat
ctcaccgcaggcgacccagcagagacagactacacggcggtgggctgtgccgtgaccacc
atctcctccaacctaacggagatgtccaagggggtcaagctgctcgccgccctcatggag
gatgagggaggcaacggaaaccagttgttgggggctgccaagaacctggcgtgtgccgtg
tccgacatgctaaagaccgcccagccagccaacactgagccccgtcagaaccttctgcag
gctgcaggcaacgtgggccaggccagtggcgagctgctgtctcacatcggagagacggac
gccgacccccgctttcaggacatgcttatgcagctggctaaagccgtggctaacgccgcc
gccgctctggtgctcaaagcaaagaacgtggcccagaagacagaggactctgcactccag
aaccgcgtcatcgccgcggcgacccaatgtgccctatccacctcccaactggtggcttgc
acccgggtggtcgctcccaccatcagctctccggtgtgccaggagcagctgattgaggca
ggcaagctggttgccaaatcggtggatggctgcgtggatgcgtcgcagggcgccaccagc
gatgaggggctcctcaagcaggtgggcgccgccgccacaggcgtcacccatgccctcaac
gagctcctgcagcacatcaagcagtacgcccacggaggccagcccatagggcgccacgga
gaggccaccgaccgcatcctggatgtcaccgagaacatcttcagctccatgggagatgcc
ggtgagatggtgcgtcaggcccgcatccttgcccaggccacctcggacctggtcaacgcc
atcaagatggacgcagagggcgagtcagacctggagaattcccgcaagctgctgtcagcc
gccaagctcctggcagacgccacggccaaaatggtggaggctgccaagggcgcagccgcc
aacccggacagtgaggagcagcaacagagactgagggaggcagcagagggcctacgcatg
gccaccaacgcggctgcccagaatgccatcaagaagaggctggtcaacaagctggagaac
gcagccaagcaggccgccgcggccgccactcagactatagccgccgcccagcacgccgcc
tcgtccaataagaacccagcagcccagcagcagctcgtccagagctgcaaggtggtggca
gaccagatccctcagctggtccagggagtgcgtggaagccagtcccagcccgacagcccc
agtgcccagctcaccctcatcggggccggtcagaacttcctcctgcctggtgccaagatg
gtgacggctgccaaggccacagtacctaccattggcgaccaggcctctgccatgcaactc
agccagtgtgccaagaaccttgccactgcccttgccgagctccgcacggccgcacagaag
gcacaggaagcatgtggtcctctggagatcgacaatgctctgacggtggtccgaggcctg
gagaaagacatggtggaggccaaggcttcagctggcgatggcaaactcaaacccctgccc
ggagagacgctggagaagtgctctcaggacgtgggcaacagcactaaggctgtgagctct
gccatcgcccagctgctgagtgaggccacccagggcaatgagaactacacaggtatggca
gccagagacgtggctcaggcattgcgcgctctggcctcggccgcccgtggggttgccgcg
acgaccgccgaccctcaggcccgcaacgccatgctggactgcgctggtgacgttatggac
aagtcggccaatttgatcgaagaaaccaagagagccattgccaagccgggagatcctgac
agccagcagagactggcacaggtggccaaggctgtatcccaggccctgaacaggagtgtg
aactgcctgcctggacagagagatgtggacaacgctataagaacagtcggagaggccagt
aagaaactactggccaattctttcccacccagtgggaagagtttccaggaggcgcaggtc
aacctgaaccaggctgcagccggtctcaaccagtcagccaatgagctggtccagtcgtcc
aggggcaccacccaggacctggccaaggccactggcaagttcggccatgacttcggagag
ttcctggatgccggcgtggacatggccggccagtcacagaacaaggagaaccagacgcag
gtggtgtccaacctcaagaccatctccatgtcgtccagtaagctgctgcttgccgccaag
gtcctgtccaccgaccccaactcccccaacctcaagaaccaactagcagctgctgctcgt
gccgtcactgacagtatcaaccagctcatcaccatgtgtacccagcaggccccgggccag
aaggagtgtgacaatgctctccgggagctcgagactgttcggggactgcttgagaacccc
accgaggcggtcagtgacctctcctactttgactgcatcgacagtgtcatggagaactct
aaggtcctgggggaagccatggctggaatctcccacaacgctaagaacagcaatctgcct
gagtttggagactctgtcagctctggctctaaagccctgtgtggccttacggaagcagct
gcccagggtgcctacctggttggagtgtcagaccctaaaagccacgcgggccagaagggg
ttggtggaccctggccagtttgcccgtgccaaccagtccatccagatggcatgccagaac
ctggtggacccggcctgcacccagtcccaggtcctctctgccgccaccatcgtggccaag
cacacttcggcgctgtgcaatgcctgtcgcctggcctcctccaaaacagccaaccctgtt
gccaagcgacagtttgtccagtctgctaaggaggtggccaacagcacagccaatctggtc
aagtccatcaaagctctggatggagcgtttaaccagcagaacagagagaagtgtagggtc
gccacagggcccctgatagaagctgtggataacctcaccgccttcgcctccaacccagaa
ttcgccagcgtgcccgctcagatcagcgctgagggcctggcagcgatggagcccatcgtg
gttgcagctaagaccatgctggagagctccacaggtctgatccagaccgctcgctccctg
gccgtcaaccccaaagacccccccaagtggtcagtgctggccggacactccaggaccgtt
tccgactccatcaagaaacttatcaccaacatgagagacaaagccccaggccagagggag
tgtgacgaggccatcgaggtgctgaacaactgtattcgggaggttgaccaggcctccctg
gcagccatcagccagcagctcaccccaagagaggacatctcccaggaggctctgcatgag
cagctggcagcttcggtccaggagatcagcaatctgatagagccggtggccatcgcagct
cgctctgaggcttcccatctgggacacaaggtgtctcagatggtgagctatttcgagccc
ctcatcatggcagccatcggcacggccagtaagattcagagcagccaacagcagatggca
gtgttggaccagaccaagacgctgacagagtcagccctgcagatgctctacacagccaag
gaggccggaggaaaccccaaggcggcccacacccaggaggctctggaggagtctgtccag
atgatgaaggaggcggtagacgacttaggcgccaccctgtcggagacggccagcgctgcg
ggcgccctgggcggcatggtggactccatcaccgccgccataaacaagatggaggagagc
cctgccggcgagcccgatggctcctttgtggattaccagactaccatggtgaagactgcc
aaagccatcgccgtcaccgtgcaggagatggtgactaagtccaacaccaacccagatgac
ctgggaggtctggccagcgagcttactaatgagtttggagagctagccaccgaggccaaa
tacgctgccatcactgcagagaacgacgagattggttcccacatcaagaagcaggttggg
gagctcggcttcaactgtactgggctggtgactaaggccggagctctacagtgtagtccc
aacgactccttcaccaagaaggagctgatcgacagcgcacgcaaggtctccgagaaggtg
tctcatgtgctggcggcccttcaggctggtaaccgtggcacccaggcctgcatcacagca
gccagtaccgtgtcgggcatcatcgccgacctggacaccaccattatgttcgccaccgcc
ggcacgctcaaccgtgagaactcggaaaccttcgccgaccacagagagcacatcctaaag
acagccaaggcgctggtggaggacaccaagctgctggtctctggtgccggggccagccag
gagagactggcccaggctgcccagtcctccgtcatcaccatcaccaaactggccgacgtg
gtaaaactgggtgccgccagcctgggcgccgaggaccccgagacacaggtggtcctgatc
aacgctgtcaaagacgttgccaaggctctgagtgacctcatcagcgctaccaaggccgct
gcaggcaagcctcacgacgaccctgccatgctgcagctgaagaactctgccaaggtgatg
gtgaccaacgtgacgtcactcctgaagacagtgaaggcagtggaggacgaggccaccaag
ggcacacggggactggaggccaccattgaacacatcaaacaggaactagctgtgttcagc
aatggcgatcctccccccaagacgtccactccagaggatttcatccgcatgaccaaaggc
atcacccaggcaacagccaaagcagtggctgctgggaactcgtgtcgccaggaggacgta
atcgctacggccaacctgagcaggagggccatcgccgacatgctgcactcgtgcaagcaa
gccgcctaccacccagaggtcagcaaggaagttcagaaccgggccctgcgctatggcaac
gagtgtgccttgggctacctgggtctgctggagcatgtgctagtgccgatcatccagaag
cccagccacgagctcaagcagcagttggctaactactccaagcgcgtggcaggctccgtc
accgagctcatccaggccgccgaggccatgaagggaacggaatgggtggaccccgaggac
cccacggtcatcgctgagaacgagcttctgggagctgctgctgccattgaagcagccgcc
aggaaactggagctgctgaggccccgcaccaaacccaaggaagcggacgagagcctgaac
ttcgaggagcagatcctggaggcggccaaatcgatcgcagccgccaccagtgctctggtc
aaagctgcctcagccgcccagagggaactggtggcccaagggaaggtcggtgcctgccca
gccaatgcagtggatgatggacagtggtctcaaggtctcatttcagccgcccgaatggtt
gctgcggcgaccagcaacctgtgcgaggcggccaactcggcggtgcagggccacgccagc
gaggagaagctcgtcagctcggccaagcaggtgtctgcctccactgcccagctcctggtg
gcctgcaaggtcaaggctgaccaggactcccagaccatgaagaggctacaggctgccgga
aatgctgttaagagggcctccgatagcctggtgaaggcggcacagaaagcagcctttgac
gcccaagacgagcaggccgtggttgttaagagcaagatggtgggaggcattgctcagatc
attgctgcccaggaggaaatgctgaggaaggagagggagttggacgaggccagaaagaag
ctggccaccatccgacagcagcagtacaagttcctgccctctgagctcagggaggacggg
caggagcagtga
DBGET
integrated database retrieval system
