Oncorhynchus tshawytscha (Chinook salmon): 112220368
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Entry
112220368 CDS
T05605
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X1
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04148
Efferocytosis
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112220368
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112220368
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112220368
04261 Adrenergic signaling in cardiomyocytes
112220368
Enzymes [BR:
otw01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
112220368
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
Motif
Other DBs
NCBI-GeneID:
112220368
NCBI-ProteinID:
XP_024237987
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All DBs
Position
LG20:24614962..24669291
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AA seq
1043 aa
AA seq
DB search
MENAHTKTVEEVYSHFNVNESTGLGLDQVKRQREKWGPNELPAEEGKSLWELVAEQFGDL
LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK
EYEPEMGKVYRQDRKSVQRIKSKDLVPGDIVEVAVGDKVPADIRLTSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFCGTNIAAGKAVGVVMATGVNTEIGKIRDEMA
STEQERTPLQQKLDEFGEQLSKVISLICIAVWLINIGHFSDPVHGGSWIRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFIIDQAAGDSCSLKEFTITGSTYAPEGQVYHDGKPVKSSQYDGLVEMASICALC
NDSSLDYNEIKGVYEKVGEATETALTCLVEKMNVFDTDVKGLSKIERANACNSVIKQLMK
KEFTLEFSRDRKSMSVYCTPNKAHSSIGKMFVKGAPEGVLDRCTHIRVGGNKVPLTPGIK
DKVLSVIREYGTGRDTLRCLALATKDNPIAKEDMVLEDSNRFIEYEMDLTFVGCVGMLDP
PRAEVAASIKLCRLAGIRVIMITGDNKGTAIAICRRIGIFSDKDDVSSMAFTGREFDDLS
PAAQRDAVVNARCFARVEPSHKSKIVEFLQSMDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG
FPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKVPRNAREPLISGWLFFRYLAIGC
YVGVATVGAATWWFVAAEDGPRITFYQLSHFLQCGPDNPEFDGLKCELFESPYPMTMALS
VLVTIEMCNALNSVSENQSLLRMPPWENVWLLGAICLSMSLHFLILYVEPLPIIFQITPL
NLTQWLMVLKLSLPVLLLDEVLKLAARNYMENYPGKELEKPSSKGCSLSACMEGISWPFV
ALTLPLVLWIYSTDTNMADMFWS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgctcacacaaagacagtggaggaagtttacagccatttcaacgtgaacgaa
agcacaggtctaggtttagaccaggtgaagaggcagcgggaaaaatggggacctaacgaa
ttgcctgctgaggagggaaagtctttatgggaactggtagctgaacagtttggagatcta
cttgtgaggattcttcttcttgcggcctgcatatcctttgtgctggcctggtttgaggag
ggagaggagaccatcacagccttcgtggagccttttgtaattttgctgattctgatagca
aatgccattgtgggtgtctggcaggagcgaaatgcagagaatgccattgaagcgctcaaa
gagtatgagccggagatgggaaaggtgtaccggcaggacaggaagagtgtgcagaggatc
aagtccaaggaccttgtaccaggggacatcgtggaggtggccgttggcgataaagttcct
gcagatattcgactcacctccatcaaatccacaaccctgagggtggaccagtccattctg
acaggggagtctgtctctgtgatcaagcacactgacccggtgcctgacccccgggctgtc
aaccaggacaagaagaacatgctcttctgtggcaccaacatagcagcgggtaaggcagtg
ggtgttgtgatggccacaggcgtaaacacggagattggcaagattcgtgacgagatggcg
tccacggagcaggagcgtacacctctgcagcagaagctggatgagttcggggagcagctg
tccaaggtcatctccctgatctgcattgctgtgtggctcatcaacattggccacttcagt
gaccccgtccacggaggctcctggatccgtggcgctgtgtactacttcaagattgctgtg
gccctggccgtggccgccatcccagagggtctgcccgctgtcatcaccacctgtctggct
ctaggaacccgccgcatggccaagaagaacgccatcgtccgcagcctgccctctgtggag
accctgggctgcacctccgtcatctgctccgataagactggcaccctcaccaccaaccag
atgtctgtctgcaggatgttcattattgaccaggcggcgggcgatagctgctccctgaag
gagttcacaatcactggctccacatacgcccctgagggacaagtgtaccatgatggtaaa
ccagtcaagtcctcccagtatgatggcttagttgagatggcctccatctgtgccttatgt
aacgactcctccctggattacaatgagataaaaggtgtgtatgagaaggttggcgaggct
acagagactgccctcacctgcctggtggagaagatgaacgtgtttgacaccgacgtcaag
ggcctgtccaagatcgagagagccaatgcctgcaactctgtgatcaagcagctgatgaag
aaggagttcaccctggagttctccagagacaggaagtcaatgtctgtgtactgcacaccc
aacaaggcccactcctccattggcaagatgtttgttaagggagccccagaaggagtgctt
gacaggtgcactcacatccgtgtgggcgggaacaaggtgcccctgactccgggcattaag
gacaaggtattatcagtgatcagggagtacgggacggggcgtgacacactgcgctgcctg
gccctggccacaaaggacaaccctattgccaaagaggacatggtgttggaagactcaaac
cgctttattgaatacgagatggacctgacgttcgtgggttgcgtgggcatgctggaccct
cccagggcggaggttgccgcctccatcaagctgtgccgcctggccggcatccgtgtcatc
atgatcaccggcgacaacaaaggcacagccattgccatctgccgccgcatcggtatcttc
agtgacaaagacgatgtctcctccatggccttcaccggccgcgagtttgacgacttgtcg
ccggctgcccagagagacgcggtggtcaatgcacgctgctttgcccgtgtggagccgtcc
cacaagtccaagattgtggagttcctacagtccatggacgagatcacggccatgactggt
gatggtgtgaatgatgcccctgctttgaagaaggcagagattggcatcgccatgggttca
ggcacggctgtagctaagtcagcctctgagatggtcctggctgatgacaacttctctacc
atcgtggcggctgtggaggagggcagggccatctacaacaacatgaagcagttcatccgt
tatctcatctcctccaacgtgggagaggtcgtctgcatcttcctgacggctgctctaggc
ttccccgaggctctgatccctgtccagctgctgtgggttaacctggtgacggacggcctc
ccagccactgccctgggcttcaacccccctgacctggacatcatgaacaaggtcccccgc
aacgcccgcgagcccctcatctctggatggctctttttcagatacctcgccatcggatgc
tatgtgggtgtggctacagtcggtgctgctacctggtggttcgtcgctgctgaggacgga
cccaggataaccttttaccaactgagccacttcctgcagtgtggtcctgacaacccagag
tttgatggtttgaagtgtgagctgtttgagtccccctaccccatgaccatggccctgtct
gtgcttgtcaccatcgagatgtgcaacgccctcaacagtgtgtcagagaaccagtccctg
ctgcgtatgcccccctgggagaacgtgtggctgctgggagccatctgcctctccatgtcc
ctgcatttccttatcctctatgtggagcccctgccgatcatcttccagatcacccctctg
aacctgacccagtggctgatggtgctgaagctctccctgcccgtcctcctgctggatgag
gtcctaaagttagcagccaggaactacatggagaactaccctggtaaagagctggagaag
cccagcagcaaaggctgctctctgtctgcatgtatggagggcatctcctggccctttgtg
gccctcaccctccccctggtgctgtggatttacagcaccgacactaacatggcagacatg
ttctggtcctga
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