Oncorhynchus tshawytscha (Chinook salmon): 112221021
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Entry
112221021 CDS
T05605
Name
(RefSeq) polycomb group RING finger protein 1 isoform X1
KO
K11487
polycomb group RING finger protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112221021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112221021
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
112221021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
TRAF3_RING
zf-Nse
zf-ANAPC11
Rad60-SLD
zf-C3HC4_4
GP180_GOLD
DUF4047
ubiquitin
GH3_N_vert
Zn_Ribbon_1
zf-RING_10
EHMT1-2_CRR
Motif
Other DBs
NCBI-GeneID:
112221021
NCBI-ProteinID:
XP_024238838
LinkDB
All DBs
Position
LG21:15271530..15279590
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AA seq
275 aa
AA seq
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MAEQGPMAIAMRLRNQLQSVYKLDPLRNEQEEVKLKIKDLNEHIVCYLCAGYFIDATTIT
ECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQESEDK
RIKEFYQSRGLERVVQPPGEDSIPDTGLPFTSFDHSKAHFYRYDEQVSLCLERQSSSLSE
KKDKTKLTLHVSRVEWNPTMPPEQKFVRCSVRAEVRHLRKVLCHRLNVEKHQIQMLFNNE
SLPDHMTMKRLWISHWFGKAQPLVLHYTIKDKRTR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaagggccaatggcgatagctatgcggctaagaaatcaactccagtccgta
tataagctcgacccgttacgaaatgagcaggaggaagtgaagttgaagatcaaagacctg
aacgagcacatagtgtgctatctctgtgctgggtacttcatcgatgccacaactattacc
gagtgtctgcatacattctgtaaaagttgtatcgtgaaatacctccaaaccagcaagtat
tgtccaatgtgcaacataaagattcatgaaacccagcctttattgaacctgaaattggat
agagtgatgcaagacattgtctacaaactggttccaggacttcaagaaagtgaagacaag
agaataaaggaattctatcagtcgcgtgggcttgagagagttgtccaaccacctggggaa
gactccataccagatacaggattaccttttaccagctttgaccattccaaggcccacttc
tacagatatgacgagcaggtctcgctttgtctagagaggcaaagttcatctctgtctgaa
aaaaaagataagaccaaactgactcttcatgtaagtcgtgtggaatggaaccccactatg
ccaccagagcagaagtttgtgcgctgctcggtccgagctgaggtgagacacctgcgtaaa
gtgctgtgtcatcgactgaatgtggagaagcaccagatccagatgttgttcaataatgag
tcccttccagatcacatgaccatgaaacggctgtggatctctcactggtttggcaaggct
caaccgttggtccttcactacactattaaggacaaaaggacaagatag
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