Oncorhynchus tshawytscha (Chinook salmon): 112221551
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Entry
112221551 CDS
T05605
Name
(RefSeq) semaphorin-3ab isoform X1
KO
K06840
semaphorin 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_2
Ig_3
V-set
Ig_6
WD40
Sugar-bind
Motif
Other DBs
NCBI-GeneID:
112221551
NCBI-ProteinID:
XP_042159879
UniProt:
A0A8C8K7R8
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Position
LG22:22907972..22941322
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AA seq
765 aa
AA seq
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MWRFVTLVLLAHLGSSLTGAWRASQPRLQFTHSELVQNGRLLSLPLAAGDMHSLLPDEDG
RRLYVAMKDNLLSTSLDDITQKPHMLYWPASPDRVQECLMAGKDRELECANFLRVLQPYN
QTHLYVCGTGAFNPRCAFIPTNVFLQSERQTLSFGETECGKGKCPYDPHQKTATAIIDGE
LYAGISSDFMSRDSAFFRNLGSRHVIRTEQYDSTWLQDAQFVKVASMAETDNPEDDKVYV
FFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARIVCSIPGSDGIQTH
FDQLQDIFILHDGKDKKNPLIYGLFTTSSDVLNGSAVCVYRMQDVVRAFKGNFYHKEGPQ
YKWAEFTGKVPYPRPGTCPSSTYGSYSSTREYPDDVIFFSRTHPLLQEAVLPQGGRPLLV
RVGVHYKFSRLLVDRVEAVDGQYDVLFIGTDSGQVLKSIPLPKEHGVTQEVTLEQLQVFQ
HKSPVTTMTLSKKKQWLFVGSAEGVAQLALFQCELYGQACTECCLARDPYCTWDGHACSP
FMPIARRRNARQVGDEEDPLTQCVRQGAGLQVKAEQRMMMVAEGNSTYLECMPKSRHAAV
TWYIQAGENSPELHQLQSGEQLVVIERGVLIRQAETGHSGMYHCQLEEHGFRWTAVTIRL
SVWSPSRALSWSPNNPNPSPDAFQPWYQDVMALIHPSSLEKHCQRLGFRQRRNRNRDLDQ
TKGTNRKTGDGPRGERHKHGGRGGGGGGGGRKSRSKPQQRSPRSA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggttcgtgaccctggtcctcctagcccacctggggagcagtctgacgggggca
tggagagcctcccagcctcgcctgcagttcacccactcagagctggtccagaatggccgt
ctcctgtccctgcccctggcggcgggggacatgcactctctgctgccagacgaagatggc
cgccggctctacgtggccatgaaggacaacctgctgtccacaagcctggacgacatcaca
cagaagccacacatgctctactggccagcaagtccagaccgggtccaagagtgtttgatg
gctggaaaggaccgggagttggagtgtgctaacttcctgcgggtgctacagccctacaac
cagacccacttatatgtgtgtggaacgggagccttcaaccctcgctgtgccttcatcccc
accaatgtcttcctccagtcggagcgacaaactctgtcatttggagagactgaatgtggg
aagggaaagtgtccatacgatccacaccagaaaacagccacagccattattgatggcgag
ctgtacgctgggatctcttccgacttcatgagtcgagactcggccttcttccgcaacctg
ggcagtcgtcatgtgatccgcaccgagcagtacgactccacctggcttcaggatgcccag
tttgtgaaggtggcctcgatggcggagactgataacccagaggatgacaaggtgtacgtg
ttcttcactgagcgggctcaggaggcagagggggctgctgggaaggtgctgtactcccga
gtggcacgtgtctgcaagaatgacatcgggggtcagaggagtctggtgaacaagtggagc
accttccagaaggcacgtatagtctgctctatccctggatccgacgggatacagactcac
tttgatcaactacaggacatctttatcctccatgatgggaaggacaagaagaaccctctt
atctacggactctttaccacatccagtgacgttctgaatggttcggcggtgtgtgtgtac
cgcatgcaggacgtggtaagggccttcaagggaaacttctaccacaaggagggaccgcag
tacaagtgggctgagttcacaggaaaggtcccctatccaagacctggcacatgtcccagc
agtacatacggtagctacagctccacccgggagtaccctgatgatgtcatcttcttcagc
cgtacccaccctctgctgcaggaagcagtgctgccgcagggagggcgccctctgttggtc
agggtgggagtgcactacaaattcagccgactgctcgtggaccgagtagaggcagtggac
ggacagtatgacgtcctgttcattggcacagactcaggccaggtgctgaagtctatcccc
ctccctaaagaacacggtgtcacccaggaggtcaccctggagcagctgcaggtcttccag
cacaagtcacctgtgactaccatgacactgtccaagaaaaagcagtggctgtttgtgggt
tctgcggagggtgtggcccagttggctctgttccagtgtgagctgtacggccaggcctgc
actgaatgctgtctggccagagatccctactgcacctgggacggacacgcctgcagcccc
ttcatgcccattgcacgcaggaggaacgctcgccaggttggtgatgaggaggaccctctg
acacagtgtgtcagacagggagctggtctgcaggtgaaagcagagcagaggatgatgatg
gttgccgagggtaacagcacctatctggagtgcatgcccaaatccagacatgcagccgtc
acctggtacatacaggcaggagagaacagccctgagctgcatcagttgcagtcaggagag
cagctggtggtgattgagagaggtgttctgatccgtcaggccgagacgggtcactctggc
atgtatcactgtcaactggaggagcatggcttccgttggactgccgtcaccatccgtctg
agtgtgtggagcccctcccgtgccctctcctggtcccctaacaaccccaacccaagccca
gatgccttccagccttggtaccaggatgtcatggccctcatccatcccagcagcctggag
aagcactgtcagaggctgggcttccgacaacgccggaaccgcaaccgcgacctggatcag
accaagggcaccaaccgcaagacaggggacggccccaggggcgagaggcacaaacatgga
ggccgaggtggaggtggaggaggaggcgggaggaagagcaggagcaaaccccagcagagg
tctccacgaagtgcttag
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