Oncorhynchus tshawytscha (Chinook salmon): 112223194
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Entry
112223194 CDS
T05605
Symbol
slc6a11a
Name
(RefSeq) solute carrier family 6 member 11a
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112223194 (slc6a11a)
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112223194 (slc6a11a)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
112223194
NCBI-ProteinID:
XP_024242009
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Position
LG02:complement(41008959..41040670)
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AA seq
599 aa
AA seq
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MAASLSAGKHETLPGPVQDTQQSVKERGQWDSKMEFILTVAGAIIGLGNIWRFPYLCYKN
GGGAFFIPYILYLVTCGIPLFILETALGQYTSQGGITCWRKICPVFEGMGYAAQVITIYG
CMTYIVILAWAFLYLFSSFSVDLPWANCNNAWNTDACVTFGTKNASSNWTGSLLNSSSSV
VEFWQRRVLRISDGIESLGGIRWELALCLLLSWIVCYFCIWKGVKSTGKAAYVTATFPYV
MLVVLFVRGVTLPGAKDGIFYYLYPNTTRLADPQVWMDAGTQIFYSYAIGLGYLTSLGSY
NKYNNNCYKDSFYLCLLNSGTSFVSGFAIFSILGHMAREQGVDISVVAESGPGLVFIVYP
QAVSLLPCPQFWAVCFFSMIILLGVDSQFVGLESLMTSVTDVYPNLIRKGYRREMLLLLI
CCCCYLVGLIMVTEGGLYIIQLFDHYVCSGATLLLLSICQSLSIGWIYGAERFCDNIEDM
IGYRPSSLVKYCWLYITPTICTGTFVFSLLKYSPLKFNNTYLYPWWAYWLGWFLAMSSLS
LIPITMVYKLYWGKGNFWQRLQTICRPADDLPMMMKEEMVGLYALDHVTDDEKTYSNNL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttctctctctgcaggcaagcatgagactctcccagggccggtgcaggacacc
caacaaagtgtgaaggagcgcggccagtgggatagcaaaatggagtttattctaactgtg
gctggcgctattattggacttggaaatatatggagatttccctatctttgttacaagaac
ggtgggggggcgttcttcatcccgtacattctgtacctggtgacctgtggcatccccctg
ttcatcctggaaacggctctgggccagtacactagccagggtggcatcacctgctggaga
aagatctgcccggtgtttgaaggaatgggctatgccgcccaagtgattaccatatatgga
tgtatgacctacattgtgattctggcgtgggctttcctctacctgttctcatccttcagt
gttgacctgccatgggccaactgcaacaatgcctggaacacagatgcttgtgtgacattt
ggcaccaagaatgccagcagcaattggactggttctctcctgaattcgtcatcttccgtt
gtggagttttggcagcggcgagtgctgcggatatcagatgggattgagtccttgggaggt
attagatgggagctggctctgtgtcttctactgtcatggattgtctgttacttctgtatc
tggaaaggagtgaagtctactgggaaggcagcgtacgtcacggctaccttcccctatgtc
atgctagtggtgttatttgtcagaggagtgacccttccaggagctaaagatggcatcttc
tactacttgtatcccaatacaacacggctagctgatccacaggtttggatggatgcagga
acgcagatattctattcttacgccataggcctgggctacctgacttctcttggaagctac
aacaaatacaacaacaactgttacaaagactccttctacctgtgcttgttgaacagtggg
accagcttcgtgtctggttttgccatcttctccatactgggtcatatggctcgagaacag
ggtgtggacatctctgtggttgctgagtcaggtcctggcctggtgttcatagtgtacccc
caggcagtgtccctgctcccctgccctcagttctgggctgtctgtttcttctccatgatc
atcctattgggagtggacagccagtttgtcggccttgagagcctaatgacctcggtaacg
gacgtctacccaaacctcatcagaaaaggctaccggagggagatgctgctgctgctcatc
tgctgctgctgctacctggtcggactcatcatggtcacagagggtggcctctacatcatc
cagctgtttgaccattatgtgtgcagtggtgccactctgctgctcctctccatatgccag
tcactcagcattggatggatatatggtgctgaacgcttctgtgacaacattgaggatatg
attggctataggccctcctccctggtcaagtattgttggctctacattacccctactatc
tgcacaggaacctttgtattttccctgctgaagtacagccctttgaagttcaacaacaca
tatttgtacccatggtgggcctactggctaggctggttcctggctatgtcctccctatct
ctcatccccatcaccatggtctacaaattgtactggggcaaagggaatttctggcagcgc
ctccagacaatctgtcggccagcagatgaccttcctatgatgatgaaggaggagatggta
ggtctctatgctctggaccatgttactgacgatgagaagacatacagcaataatctatag
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