Oncorhynchus tshawytscha (Chinook salmon): 112225252
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Entry
112225252 CDS
T05605
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
112225252
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112225252
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112225252
Ion channels [BR:
otw04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112225252
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7536
Motif
Other DBs
NCBI-GeneID:
112225252
NCBI-ProteinID:
XP_024244788
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All DBs
Position
LG26:complement(15167040..15178164)
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AA seq
457 aa
AA seq
DB search
MNRLLFVSHLLITLAGSAWSSEDETRLVKTLFTGYNKVVRPVAHFKDPVVVTVGLQLIQL
ISVDEVNQIVNSNVRLKQQWKDVNLQWNPEDYGGIKKIRVPSTDIWRPDLVLYNNADGDF
AIVHETKVLLEHTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVVVNP
DSDRPDLSNFMESGEWVMKDYRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVNVII
PCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLF
TMVFVIASIIITVIVINTHHRSPSTHTMSPWVRKIFIDTIPNLMFFSTMKRPAKERQDKN
IYGADFDISDISGKPTPTAVTYQSPMTKNPDVRSAIEGVKYIAETMKSDEESNSAAEEWK
FVAMVLDHILLCVFMAVCIIGTLGVFAGRLIELSMTP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtctactttttgtttctcatctccttatcactctagcaggctctgcctggagc
tctgaggatgaaacccgtctggtgaaaaccctgttcactggctacaacaaggtggtgcgt
cctgtcgctcacttcaaggacccagtggtggttacagttggcctgcagctcattcaactc
atcagtgtggatgaggtcaaccagattgtcaacagcaatgttcgactgaaacagcaatgg
aaggatgtgaacttgcaatggaatcctgaggattatggcggaatcaaaaagataagagtg
ccctccactgacatttggcgtcctgacctcgttctctataacaatgctgacggtgacttc
gccatcgttcacgagaccaaagtgctgctggagcacacgggcatgatcacgtggaacccc
cctgccatcttcaagagctactgtgagatcatcgtgctgcacttccccttcgacctgcag
aactgcagcatgaagctgggcacctggacctacgatggcaacttggttgttgtcaatccc
gacagcgaccgtcctgacctgagtaacttcatggagagtggagagtgggtgatgaaggac
taccgcagctggaaacactgggtgtactatgcctgctgcccagacacgccctacttggac
atcacctaccacttcctgatgctgcggctccccctctacttcatcgtcaacgtcatcatc
ccctgcatgctcttctcattcctcactggcctcgtcttctatctgcccactgactctggt
gagaagatgactctgagtatctctgtgctgctgtctctgactgtgtttctgctggtcatc
gttgagctcatcccctccacctccagtgctgtgccgctcatcgggaagtacatgctcttc
accatggtcttcgtcattgcctccattatcatcactgtcatcgtcatcaacacccaccac
cgctcccccagcactcacaccatgtccccctgggttcgcaagattttcattgacaccatt
cccaacctcatgttcttctcaacaatgaagcgtcctgcaaaggagagacaggataaaaac
atctacggcgctgacttcgacatctcagacatctcaggcaagcccacccctactgcagtc
acctaccagtcccccatgaccaagaaccccgacgtacgcagtgctatcgagggggtgaaa
tacatcgctgagaccatgaagtctgatgaggagtccaacagtgccgctgaagagtggaag
tttgtagccatggtgctggatcacattctgctgtgtgtgttcatggcggtgtgtatcatt
ggcaccctaggagtgttcgcgggccgtctcattgagctgagcatgacaccgtag
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