Oncorhynchus tshawytscha (Chinook salmon): 112226853
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Entry
112226853 CDS
T05605
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112226853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112226853
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112226853
GBAF(ncBAF) complex
112226853
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
112226853
NCBI-ProteinID:
XP_042163966
LinkDB
All DBs
Position
LG28:18386143..18407803
Genome browser
AA seq
416 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAKCDSPTPPEVKLEPPTQNMPMGPGGMNPSGAPGPQPPHGHNMP
PEGMVSGGPTAPHMQNQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGAMNMPPSSHGSMG
GYNHAVPSSQGMPAQGQMNMTQGQGPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPV
GGGQHYQGQQNPMGMMGQVNPGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAG
QGASEERDPAANQQSPYEKDHGNAQYGQQQEAYQQGPPQQQGYPPQQQYPGQQGYPGQQQ
GYGPSQGAPGQYPQGYPQGQGQQYGAYRGPQPGPPQAQQQRPYPGYDQGQYGNYQQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacagacaacgtggaaagggtgatataacacccgctgga
attcaaaagttactggatgagaacaatcagctgattcaatgtataatggatttccagagc
aaaggaaagaccgcagaatgttcacagtaccaacaaatgctccacagaaatttggtttac
ctggccacgatagcagactccaatcagaacatgcagtctctgctccctgctaagtgtgac
tcccctactcctccagaggtaaagcttgaaccacccactcagaacatgcccatgggccct
ggtgggatgaacccgagtggagcgcctggcccccagcccccccacggacacaacatgccc
ccggagggcatggtcagcggcggccccactgccccacacatgcagaaccagatgaacgga
cagatgcctgggcccaatcacatgcccatgcagggccccgggcctggccccaaccagcct
cccaacatgcccggaagtggcgccatgaacatgccccccagcagccacggttccatgggt
ggctacaaccacgctgtgccctcgtctcagggcatgcctgcccagggccagatgaacatg
acccagggacagggacccatgggcaactacggcccccggcccaacatgaacatgcagcct
aaccaaggccccatgatgcaccagcagcctccctcccagcagtacaacatgccccctgtg
ggtggcgggcagcactaccagggccagcagaatcccatgggcatgatgggtcaggtcaac
ccgggaaaccatgtcatggggcagaggcccatgcccccttacagacccccacagcaagga
ccccctcagcagtacccagggcaggaagactactatggggaccagtacagtcacgcagga
cagggagcttcagaagagcgagacccagcagccaaccaacagtccccctatgaaaaagat
catggaaacgcccagtatggccagcagcaggaggcctaccagcaaggtcctcctcaacag
cagggctaccccccacagcagcagtaccccggacagcagggctatcctggacagcaacag
ggttatggtccatcccagggagctccaggccagtaccctcagggttacccccagggccag
gggcagcagtacggggcctaccggggcccccagcccggcccccctcaggcccagcaacaa
cgcccatacccaggctacgaccagggtcaatatggaaattaccagcaatga
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