Oncorhynchus tshawytscha (Chinook salmon): 112229043
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Entry
112229043 CDS
T05605
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112229043
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112229043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112229043
NCBI-ProteinID:
XP_024250694
UniProt:
A0A8C8FFV1
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Position
LG30:complement(731072..737587)
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AA seq
252 aa
AA seq
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MYVSYLLEKEPSMYPNSVRHPSLNLNHQNFVPAPPQYSDFSGYHHVAGINNDPHHSQTGA
WNPGYPPSREEWSPYGPGTGPSTSNPGPIGYSPPEFSPIPQSGLLPSINSSVGQLSPNSQ
RRNPYDWMRRSVPPANSGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELATS
LSLSERQVKIWFQNRRAKERKVNKKKMQQPQPASTTTPTPPGSGMPGNVAMVTSSSGGLV
SPSIPMTIKEEY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttatcttttggagaaggaacccagcatgtacccaaattcagtgcgacat
cccagcctaaacttgaaccatcagaactttgtccccgcacctccacagtattcggatttc
agcggataccaccacgttgctgggattaacaatgaccctcaccacagccagaccggggcc
tggaaccccggttacccgccgagccgggaagagtggtcaccctatgggccggggacagga
ccgtccacatctaatccggggccaataggctatagtcccccagagttctctccaattcca
caatccgggcttctcccgtctatcaactcatctgttgggcagctgtctcccaattctcag
cgcagaaacccttatgattggatgaggcggagcgtaccaccggcaaattcaggtggtaag
acaagaacgaaagacaagtaccgggtggtgtacacagatcaccagcggttggagctggag
aaagagttccactatagccgctacatcaccatcaggaggaaagcagagctggccacgtct
ctcagcctctcagaacgacaggtaaaaatctggtttcagaatcggcgtgccaaagagagg
aaagtgaacaagaagaagatgcaacagcctcagcctgcgtccacaacaacacctactccc
ccaggctctggcatgcccggcaacgttgccatggtgaccagcagcagtggcggcttagtg
tctccgtctataccaatgactatcaaagaagaatactga
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