Oncorhynchus tshawytscha (Chinook salmon): 112230716
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Entry
112230716 CDS
T05605
Symbol
smad9
Name
(RefSeq) mothers against decapentaplegic homolog 9
KO
K16791
mothers against decapentaplegic homolog 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04081
Hormone signaling
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112230716 (smad9)
09133 Signaling molecules and interaction
04081 Hormone signaling
112230716 (smad9)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
112230716
NCBI-ProteinID:
XP_042167238
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Position
LG33:complement(42227606..42251328)
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AA seq
463 aa
AA seq
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MHSSTSITSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMEELEKALS
CPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEFAFGSK
QKDICINPYHYRRVETPVLPPVLVPRHSEFNPQHSLLAKFRNASLHNEPLMPQNATYPDS
FPPLPCASFSSPSSSSLTQSPTSASYPNSPSSSAEPTSPYHITDPTSPYSMMETVPTEDV
KPGDSTHKLTFSAPHIDLRPVCYEEPEYWCSVAYYELNNRVGETFHASSRSVLVDGFTDP
SNNKNRFCLGLLSNVNRNSTIEHTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNY
QHGFHATTVCKIPSGCSLKIFNNQLFAELLSQSVNHGFEVVYELTKMCTIRMSFVKGWGA
EYHRQDVTSTPCWIEVHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcattcctccacctccatcacatccctcttctccttcaccagccctgcagtgaagagg
cttctgggatggaaacaaggggatgaagaggagaagtgggcagagaaggctgtggactct
ctggtcaagaaactaaagaagaagaagggagcgatggaggagctggagaaggccctcagc
tgtcccggacaacccagtaagtgtgtgaccatccctcggtctctggacggtcgtctccag
gtgtctcacaggaagggtctaccccacgttatctactgcagagtgtggaggtggcccgac
ctacagtctcatcacgaactaaaggccttggagtgctgcgaattcgccttcggatccaaa
cagaaagacatctgtatcaacccctaccactacagacgggtagagacaccagtgcttccc
ccagtgttggtcccccgccacagtgagtttaacccccagcacagtctactggctaagttc
cggaacgcctcgctccacaacgagcccctgatgccccagaacgctacatacccggactcc
ttccctcctctcccctgcgcctccttttcctccccctcctcatcctctctcacccagtcc
cccacctccgccagctaccccaactctcccagcagctcagccgaacctaccagcccctac
cacatcacagaccccacctccccctatagcatgatggagacagtcccaactgaggatgtc
aagcctggagactccacacacaagctcaccttctcagcaccgcacatagatctgcggcct
gtgtgttatgaggaaccagagtactggtgttcagtggcgtactacgagctgaataatcgt
gttggagagacgttccacgcctcgtcccgtagcgtcctggtggacggcttcaccgacccc
tccaacaacaagaaccgcttctgtctcggcctgttgtctaacgtcaaccgcaactcaacc
atcgaacacacacgcaggcacataggaaaaggtgtccatctctactacgtgggtggtgag
gtgtacgccgagtgtctgagtgacagcagtatcttcgtccagagtcgtaactgtaactat
cagcatggtttccatgccaccaccgtgtgtaagatccccagcggctgtagtctgaagatc
ttcaacaaccagctgttcgccgagctcctctctcagtccgtcaaccacggcttcgaggtg
gtctacgaactcaccaagatgtgtactatacgcatgagctttgtcaagggctggggtgca
gagtaccaccgacaggatgtcaccagcaccccctgctggatagaggtgcacctgcacggc
cctctgcagtggctggacaaagtcctcacacagatgggctctcctcataaccccatctcc
tccgtgtcctaa
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