Oncorhynchus tshawytscha (Chinook salmon): 112230918
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Entry
112230918 CDS
T05605
Name
(RefSeq) alpha-2,8-sialyltransferase 8E isoform X1
KO
K03369
alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8E) [EC:2.4.3.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00604
Glycosphingolipid biosynthesis - ganglio series
otw01100
Metabolic pathways
Module
otw_M00069
Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
112230918
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112230918
Glycosyltransferases [BR:
otw01003
]
Terminal extension
Sialyltransferase
112230918
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_29
Motif
Other DBs
NCBI-GeneID:
112230918
NCBI-ProteinID:
XP_024253073
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All DBs
Position
LG33:complement(17555067..17577071)
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AA seq
484 aa
AA seq
DB search
MLRRRMGYADPTSGRDLLGNRSLCFIFICAFGLVTLLQQILYGKNYIKREEMGSVPSSRG
QRRGLGGYRCYAPLNGGLYAAIVCKPAQQFSRLKGDETGNWTGPVNFLDDGSLKPARNGK
KRCFRQNFQPDSQISVIVTPCLADIKKKKKRSQRYLDSYDGSYDYNSTACKELRQEIMDV
KVLTMVKTSELFERWRNLQVCKWQQNMVETNNFKMSLSRCCNAPSFLFTTKRNTPAGTKL
RYEVDTSGILPISTEVFKMFPDDMPYSKSQFKKCAVVGNGGIIKNSKCGKDIDSADFVFR
CNIPPINEKYSADVGAKTDLVTINPSIITERFQKLEKWRRPFYEVLQNYENSSVVLPAFY
NTRNTDVSFRVKYMLDDFDSQRGVFFFHPQYLLNVQRFWTVQGVRAKRLSSGLMLVTAAM
ELCEEVHLYGFWAFPMNPSGIFITHHYYDNVKPRPGFHAMPHEIFNFMHMHTRGILNVHS
GPCT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccggagaatgggatacgccgaccctacgtcgggtagagatttactcggcaat
aggtcgctttgttttatattcatttgcgcatttggactggttacacttttacaacagatt
ctctatggaaaaaactacattaaaagggaggagatgggatctgtcccatccagtagggga
cagcgtcgtggcctgggagggtacaggtgctatgcacctctcaacggtggcctatatgct
gctattgtctgtaaacctgcgcaacagtttagccgactcaaaggagacgagacaggaaat
tggaccggtcctgtaaatttcttggatgatggatctctgaagcctgccaggaatgggaag
aaaagatgtttccgtcagaattttcagccagattcacagatctccgtaatagtcacaccc
tgcctagccgatattaagaagaaaaaaaaacgctctcaaaggtatctggactcatacgat
ggatcctatgactacaactccactgcatgcaaagagctcaggcaggagattatggatgtc
aaagtcctgaccatggtgaagacgtcggagctgtttgagagatggaggaacctgcaggtg
tgcaagtggcagcaaaacatggtggagaccaacaacttcaagatgtctctgtcgcggtgt
tgtaatgcaccctccttcctgttcacaaccaagaggaacactccagcaggcaccaagctg
aggtatgaggtggacaccagtggcatcctgcccatcagtactgaggtcttcaagatgttt
cctgacgacatgccatactccaagtctcagtttaagaaatgtgcagttgttggaaacgga
ggaatcatcaagaacagcaaatgtgggaaggatattgactccgcagatttcgtgtttaga
tgcaacataccacccatcaacgagaagtactcagctgatgtaggcgccaaaacggatctg
gtgacgattaatccaagtattataacggagagattccagaagctagagaagtggcggcga
ccattttacgaggttcttcagaactacgagaactcgtcagtggtcctacccgccttctac
aacacgcgtaacactgatgtctccttccgggtcaagtacatgctggacgactttgactcc
cagaggggtgtgttcttcttccacccccagtacctgctcaatgtccagcgattctggact
gtccagggtgtccgtgccaaacgcctcagcagcggcctgatgctagtcactgccgccatg
gaactgtgcgaggaggtccacctctatggcttctgggcgtttcccatgaacccctcgggc
attttcatcacgcaccattactatgacaacgtcaagccccgccccgggttccacgccatg
ccccatgagatctttaacttcatgcacatgcacacgcgaggtatcctcaatgtacactca
ggaccttgcacataa
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