Oncorhynchus tshawytscha (Chinook salmon): 112231241
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Entry
112231241 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112231241
04082 Neuroactive ligand signaling
112231241
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112231241
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112231241
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112231241
NCBI-ProteinID:
XP_042167021
UniProt:
A0A8C8K6Z0
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Position
LG33:33570510..33586595
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AA seq
480 aa
AA seq
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MNLVLLAFRLMCLAWLWPVTLLNGSHRPNKRRHKDVYLGENSKNQHGGRIDFKMKKSDST
KSLLIKSEQLLRIEDHDFAMRPGFGGAAIPVGIDVQVESIDSISEVNMDFTMTLYLRHYW
QDDRLAFPSSSNRSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILY
SVRITVTALCAMDFSSFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEIVLSQFF
IEEFHPSFGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRA
VPARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYATVNYFT
TVEEMKKLKGGKIPANFNATQTMAFDGCYHDNDIDLMPFPELPSTPNTERSRTATLRNSR
NSAAEPPPTEGTRLRRKKSIKHNLSFIMSNSYMIDSYSRVIFPMTYLLFNIIYWSLYSSR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggtgctcctggccttcaggctgatgtgcctggcctggctgtggcctgtcaca
ctgctcaacggcagccaccgacccaacaagaggaggcacaaggacgtgtaccttggggag
aacagcaagaaccaacatggaggacgaatagactttaagatgaaaaagtctgacagcacc
aagtccctgctaattaaatctgaacagctgctccgtattgaggaccatgactttgcaatg
cggcctggctttggaggggcagctattcctgtgggcatagacgtgcaggtggagagcatt
gacagtatatctgaagtcaacatggacttcaccatgactctgtacctgagacactactgg
caggacgaccggctggccttcccttccagcagcaacaggagtcggacatttgacgcgcgg
ctggtgaagaagatctgggtgccagacgtgttctttgtccactccaaacgttccttcatc
catgacacgaccatggagaacatcatgctgagggtgtaccctgatggcaacattctctac
agtgtcaggatcactgtgactgctctttgcgccatggacttcagtagttttccattggac
acacagaattgctctctggaactggagagctacgcatacaatgagaatgacctcatgctc
tactggaagaacgggaacgattcattgaggactgacgagatcgtgctctcgcagtttttt
attgaagaatttcacccttccttcgggcttgccttctacagcagcacgggttggtataac
aggctctacataaacttcatcctcaggcggcacatcttcttcttcatgctgcagacctat
ttccccaccatgctgatggtgatgctctcctgggtgtccttctggattgacaggagggct
gtgcccgcccgggtctctctgggcatcaccacagttctgaccatgtccaccatcatcaca
ggcgtgtcagcctccatgccccaggtctcttatgtgaaagcggtagacatctatctgtgg
gccagcttcctgtttgtcttcctgtccgtcatcgagtacgccaccgtcaactacttcacc
acagtggaggagatgaagaagctcaaggggggaaagatccctgccaatttcaatgccact
caaactatggcctttgacggatgttaccacgacaatgacattgacctgatgccattccca
gagctgcccagcacccccaacacagagcggagtcggacggccacgttgaggaactcgagg
aactctgctgcagagcccccgcccacggagggcaccaggctacgacgcaaaaaatccatc
aaacacaacctcagcttcatcatgagtaacagctacatgatcgactcctactccagagtc
atcttccccatgacctacctgctgttcaacatcatctactggagcttgtactccagtagg
tga
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