Oncorhynchus tshawytscha (Chinook salmon): 112232714
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Entry
112232714 CDS
T05605
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112232714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112232714
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112232714
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112232714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-RING_4
Prok-RING_4
zf-RING_10
zf-rbx1
zf-RING_6
zf-C3HC4_4
zf-RING_11
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
112232714
NCBI-ProteinID:
XP_042155621
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All DBs
Position
LG16:complement(77132236..77145964)
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AA seq
393 aa
AA seq
DB search
MVESANNFFSSDEMSVRGGQGSDEVLVSQAVWDYLAAAGQPWLIDFQDKQGLSAGIIRRG
ERGGCCAVRLRPIEGSRSGGGPGMMEEGPISNETRKAFIDLCRCARKEMSKQDGGPKRKR
SLLPCVGVGVLEGDGEGSLLPPQPPQPRRSQRQQQRYKKPAEEEACVVLSNSTSHNESGQ
RKKDNMEVSCSMMASSHNQSHSEADDYTSCSICMGDMVERTTLERCGHAFCRLCLDQAFK
VKRACPVCRQVYGQLIGNQPPTGCMMVERDPDLELPGHEGYGCICIIYSFPPGLQAPEHP
NPGVRYPGTDRVAYLPDSPEGNRVLGLLRRAFEQRLIFTIGTSMTTGMHNVITWNDIHHK
TSLWGGPHCFGYPDPTYLVRVTEELREKGIAAD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaagtgcaaacaatttcttttcatcggatgagatgagtgtgcgcggggggcag
ggtagtgacgaggtgctggtgtcccaggcggtgtgggactacctggctgccgccggccag
ccctggctcatagactttcaggacaagcagggcttgagcgccggcatcatccgccgaggt
gagcggggaggctgctgcgcagtgcggctacgtcccatagagggatcccgttctggggga
ggacccgggatgatggaggaaggacccatctccaacgagacccgcaaggccttcatagac
ttatgccgctgcgcccgcaaagagatgagcaaacaggatgggggtcctaaacggaagagg
tccctgctgccctgcgttggggtgggggtcctggagggggatggagaggggagcctgcta
ccacctcagcctccccagcccagacgctctcagaggcagcaacagagatataagaagcct
gcggaggaagaggcctgtgtggtcctctccaactccacgtcccacaacgaatccggacag
aggaagaaggacaacatggaggtcagctgcagtatgatggcctcctctcataaccaatcc
cacagtgaggcagacgactacacctcatgttccatctgcatgggcgacatggtggagagg
accacactggagaggtgcggccacgcattctgccggttgtgtctagaccaggccttcaag
gtgaagagagcgtgtcctgtgtgtcgtcaggtgtacggccagctcatagggaaccagccg
cctaccgggtgtatgatggtggagagggacccagatctggagttgccaggacacgagggt
tatgggtgtatctgcatcatctacagcttcccacctggtttacaggcgccggagcaccct
aacccgggggtgaggtaccctgggacggaccgcgtggcttacctcccagacagcccagag
gggaaccgggtcctgggcctgcttcgccgggccttcgaacagcgcctcatcttcaccata
gggacctccatgaccacaggaatgcataatgtcatcacctggaacgacatccaccacaag
acctccttatggggcggaccacactgctttggatacccagaccccacttacctggtgaga
gtgaccgaggaactccgagagaaaggcatcgctgcagactga
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