KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112232714
Entry
112232714         CDS       T05605                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
  KO
K06058  deltex [EC:2.3.2.27]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    112232714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112232714
Enzymes [BR:otw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112232714
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112232714
SSDB
Motif
Pfam: DTC zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-RING_4 Prok-RING_4 zf-RING_10 zf-rbx1 zf-RING_6 zf-C3HC4_4 zf-RING_11 Baculo_IE-1
Other DBs
NCBI-GeneID: 112232714
NCBI-ProteinID: XP_042155621
LinkDB
Position
LG16:complement(77132236..77145964)
AA seq 393 aa
MVESANNFFSSDEMSVRGGQGSDEVLVSQAVWDYLAAAGQPWLIDFQDKQGLSAGIIRRG
ERGGCCAVRLRPIEGSRSGGGPGMMEEGPISNETRKAFIDLCRCARKEMSKQDGGPKRKR
SLLPCVGVGVLEGDGEGSLLPPQPPQPRRSQRQQQRYKKPAEEEACVVLSNSTSHNESGQ
RKKDNMEVSCSMMASSHNQSHSEADDYTSCSICMGDMVERTTLERCGHAFCRLCLDQAFK
VKRACPVCRQVYGQLIGNQPPTGCMMVERDPDLELPGHEGYGCICIIYSFPPGLQAPEHP
NPGVRYPGTDRVAYLPDSPEGNRVLGLLRRAFEQRLIFTIGTSMTTGMHNVITWNDIHHK
TSLWGGPHCFGYPDPTYLVRVTEELREKGIAAD
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggttgaaagtgcaaacaatttcttttcatcggatgagatgagtgtgcgcggggggcag
ggtagtgacgaggtgctggtgtcccaggcggtgtgggactacctggctgccgccggccag
ccctggctcatagactttcaggacaagcagggcttgagcgccggcatcatccgccgaggt
gagcggggaggctgctgcgcagtgcggctacgtcccatagagggatcccgttctggggga
ggacccgggatgatggaggaaggacccatctccaacgagacccgcaaggccttcatagac
ttatgccgctgcgcccgcaaagagatgagcaaacaggatgggggtcctaaacggaagagg
tccctgctgccctgcgttggggtgggggtcctggagggggatggagaggggagcctgcta
ccacctcagcctccccagcccagacgctctcagaggcagcaacagagatataagaagcct
gcggaggaagaggcctgtgtggtcctctccaactccacgtcccacaacgaatccggacag
aggaagaaggacaacatggaggtcagctgcagtatgatggcctcctctcataaccaatcc
cacagtgaggcagacgactacacctcatgttccatctgcatgggcgacatggtggagagg
accacactggagaggtgcggccacgcattctgccggttgtgtctagaccaggccttcaag
gtgaagagagcgtgtcctgtgtgtcgtcaggtgtacggccagctcatagggaaccagccg
cctaccgggtgtatgatggtggagagggacccagatctggagttgccaggacacgagggt
tatgggtgtatctgcatcatctacagcttcccacctggtttacaggcgccggagcaccct
aacccgggggtgaggtaccctgggacggaccgcgtggcttacctcccagacagcccagag
gggaaccgggtcctgggcctgcttcgccgggccttcgaacagcgcctcatcttcaccata
gggacctccatgaccacaggaatgcataatgtcatcacctggaacgacatccaccacaag
acctccttatggggcggaccacactgctttggatacccagaccccacttacctggtgaga
gtgaccgaggaactccgagagaaaggcatcgctgcagactga

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