Oncorhynchus tshawytscha (Chinook salmon): 112233594
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Entry
112233594 CDS
T05605
Name
(RefSeq) ras-responsive element-binding protein 1 isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112233594
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112233594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-C2H2_jaz
zf-Di19
zf-C2H2_8
zf-C2H2_11
DXP_reductoisom
zf-C2H2_REST
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
112233594
NCBI-ProteinID:
XP_024257107
UniProt:
A0A8C8ENX0
LinkDB
All DBs
Position
LG29:complement(22728078..22805990)
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AA seq
1835 aa
AA seq
DB search
MSRRKQPNPNKVKLMESATEDKRPGGGVSAELSTVETEHSEGQETPDSTHTQDEHTGSNG
AMEEGEEEDENGENMTEGVDLSSINAMLSTVMNAGQLNGAMEPSSAPASTPSISISKTTP
PRPTSVNRNARRNTEAKDVNTDFICPLCDKDCMTQHQLTMHIRQHNSDNGATDHSCSICG
KALSSASSLDRHMLVHSGERPYKCSFCGQTFTTNGNMHRHMKIHDKDPAGVIPISPPSPT
KRRRPSAKRRSAMDEDTERGDELPNKKVPEESVLEELGSGQGDDEVLPCPICFKTFGCKY
DLEVHMDTHPDTTLRCDLCCLSFRTHRGLLRHNAGIHKKMPTDPGGRPFIQNNPSIPSGF
NDLAFIDFSCRKFSHIAQVWCETNLRRSTSKFHRFVCEACDKAFPLHSALDLHKTTIHQQ
QQPSPIGGGQEIPAVQEKPTTPPPQQASFLESLGLQHISQVKPQPSEDEVRQAQLDSIRV
IQVGPPDSTLPQEAASTASGFLGGLGLVAASSLQGLSQREALSLFSLQPFPTGFLFQPDS
STAVKPVCGEAGLIELADIQQILKVALAVPGQMGLLPTLAKAPHQGVSGQAQAASCKPMP
PLKPKPMVAPRSSPAASTPPPLQSTQQASLGCISPSLPPPPSQLLNMPQDSSSSSSSSSS
SSSGSQASLEKMQMEADCMGDAHMPNDLTELQIKQEEGQAAGGKKGSGGANRGGAKASYP
CRFCDQVFAFSGVLQAHMRFHLGILPHQCNICDYVAPDKATLIRHLRTHSGERPYVCRVC
HYPFTVKANCERHLRKKHMKNTRKEIEKNIKYVSSTTTQDPLELVAAGDTACRFCGEDLK
SYRALQIHLRTHNGCQRKPFECRRCGAAFLAKRNCIHHMLKQHPEVQEREIEEHIATLLP
AITASTSRASPSNPLALNGLTPNPTATLQPVKVEDLSIYSSSGDLDQPLDFSNKSRGTSS
TAGSLTGSPGIKLETVSPAAYDCSMEPIDLSIPKNPSKRLKTDTTAVAPVSVERREIKKE
LPFPSVLDHLPSALQLEKSTEEKLTTPQSGSYQLPPVTPFSIGTTTGRALRLKPLLPKPA
STSSSCSLKELPPLASIAQIISSVSGAPDLLKREPDNKAPAALNGLQTEPDRPAGGDNSS
ETSMEELPLEGLSRKRTRKKPVSQAKTMAPACVSTLEQNTGSGLDLESSGEFASVEKMLA
TTDANKFSTYLQTGAAELGRRNEGRQSPGEEKEEKESPPQSVPPQSKGGKKNAYSNSVQK
MTCPFCPRVFPWASSLQRHMLTHTVFSNVLSATGQKPFPCPKCDAFFSTKSNCERHLLRK
HGVTNRSLRRNGQVSKNGDEGSHDSAESSENEQTAGEVLDLSSMDPDQKGDAYESPNADQ
TPDIAEQLLGEIEPQPSNNKTNNNYENEDYDDNDSQSNKSLDLNFASKLIDFKFSSDGEQ
PQTSLGGERVVVAEPERVIDVQQQDQESSKYTCKNCKKNFRYAATLARHEKAHLCESAPP
EEACGTEGTVPGTELPNATTATTEEEDQEEEGEKEAPESEGAGSVMDSGSEEEEKEKEER
SDEEGGLAEPKNGEGEVGRGSGSKADKRKKICNVCSKRFWSLQDLTRHMRSHTGERPYKC
QTCERTFTLKHSLVRHQRIHLKPRGSDGADANGAEAPAGDSASEEGECTPTSTCPPSENE
SEGTGVAREGAEKEAPLPGSTSPDQSLSTTEPAQSESATEAVAELLIKPASEPGSEPVLG
PSVEQASDNVSEIAVELAAVESASITASNTATEPATETPKESSTESPTPQPSDVTPEKDP
EGPSEGFIQGLLEIHTKPPREFTLPAGEAPLVGVE
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgtaagcagcccaaccccaacaaagtcaaactgatggagagcgccacagaa
gacaagcgtccggggggaggggtgagcgctgagttgagcactgtagagactgagcattct
gaggggcaggaaacccccgactccacacacacacaggacgagcacacagggagtaatgga
gctatggaggaaggagaggaggaagatgaaaatggagagaatatgacagagggcgtggac
ttgtcatccatcaatgccatgctgtcaacggtgatgaacgcaggccagctcaacggcgcc
atggagccctcctcagcccctgcctcaacaccttccatctccattagcaagaccacccca
cccagacccactagtgtcaatcgcaatgccaggagaaacacggaagccaaagacgtcaat
acagatttcatctgtccgctgtgtgacaaagactgtatgacccagcaccagctcactatg
cacatccgacagcacaactcggacaacggggcgacggaccactcatgcagcatctgtggc
aaggccctgagctcagccagctcgctggaccgccacatgctagtgcacagcggagagagg
ccctacaagtgctccttctgcggccagaccttcaccaccaacggcaacatgcacagacac
atgaagatccacgacaaagacccagccggcgtcattcctattagccccccctcgcccacc
aagcgacgccgcccctccgccaagaggaggtcagccatggacgaggacacagagcgaggc
gacgaactgcccaacaaaaaggtgccagaggagagtgtgttggaggaactgggatcaggc
cagggggatgatgaggtgttgccgtgcccgatctgcttcaagacctttggctgcaaatac
gacctggaagtccacatggacacacaccctgacaccactctcaggtgtgacctgtgctgc
ctctcctttcggacccaccgcggcctgctgcggcacaacgccggcatccacaagaagatg
cccacggaccccggcggacggccctttatccagaacaacccctccatcccctctggcttc
aacgacctggcctttatcgacttctcctgccgcaagttttctcatattgcccaggtctgg
tgtgaaaccaatctccgccggtccaccagcaagttccaccgttttgtgtgcgaggcctgc
gacaaggccttccccctacactcggccctagacctgcacaagaccaccattcatcagcag
cagcagccgtcgcccatagggggcggccaagagatccctgcggtccaggagaagccgaca
accccgccccctcagcaggccagcttcctggaatccctgggtctgcagcacatttcccag
gtcaagcctcagccttctgaggatgaggtccgtcaagcccagctggacagtatccgggtc
atccaggtggggcctccggactccaccctgccccaagaggcggcttccacagcttctgga
tttctgggcggcctgggcttggtggctgcttcgtctctgcagggcctgtcccagagggag
gccctcagtctgttctccctgcagcccttccccacgggcttcctcttccagccggacagt
agcactgctgtcaagcctgtctgtggcgaggctggcctgattgagctggctgacatccag
cagatcctgaaggtggccttggccgtccccggtcagatgggcctcctaccgacactggcc
aaggcaccacaccagggagtgtccggccaggcccaggcggccagctgcaagcccatgccc
ccgctgaagccaaagcctatggtggcaccgcgctccagtccggctgcctccacgccaccg
ccgctccagagcacccagcaggcttccctgggctgtatcagccccagcctgcccccgcca
cccagccagctgctcaatatgccccaagactcttcatcatcatcatcatcatcatcctcc
tcttcctcgggcagccaggcctccctggagaagatgcagatggaggcggactgcatgggc
gatgcccacatgcccaacgacttgacggagctgcagatcaaacaagaggagggccaggcg
gccgggggaaagaaggggtcaggaggggccaaccgcgggggtgccaaggcatcctacccc
tgccgtttctgtgaccaggtgtttgccttctccggggtgctgcaggcgcacatgcgcttc
cacctgggcatactaccgcaccagtgcaacatctgtgactacgtcgcacccgacaaggcc
acgctcatccgccacctgcgcacgcacagcggcgagcgcccctatgtgtgccgcgtctgc
cactaccctttcaccgtcaaggccaactgcgagcgccacctgcgcaagaagcacatgaag
aacacacggaaagagattgagaagaacatcaagtacgtctcgtcaaccaccacccaggat
cctttggagctggttgctgccggcgacaccgcctgccgcttctgcggtgaggatctaaag
agctaccgggctctccagatccacctgcgcacccacaacggctgccagcgcaagcccttt
gagtgccggcggtgcggggcggctttcctggccaagaggaactgcatccaccacatgctc
aagcagcacccagaggtgcaggagcgggagatcgaggagcacatcgccacccttctcccc
gccatcacagcctccacctccagggccagtcccagcaaccctctggctctcaacggcctc
acgcccaaccccactgccaccctgcagccggtcaaggtggaggatctcagcatctactcc
tcctctggtgacctggatcagcccttggacttctccaacaagagccgcgggacaagcagc
actgcggggagcctgaccgggtctcctgggatcaaactggagacggtcagcccagcagct
tacgactgctccatggaacctattgacctgtccatccccaagaaccccagcaagaggttg
aagacagacaccaccgctgttgccccggtgagcgtggagcgcagagagatcaaaaaggag
ctgcccttccccagcgtactggaccacctcccctcagcccttcagctggagaagagcact
gaggagaagctgacgaccccccagtctggctcttaccagctccccccagtgaccccgttc
tccattggcaccaccacaggccgggcgctccgtctcaagcccctattgcccaaaccagcc
tctacctcctcatcctgctctctgaaagagcttccccctttggcttccatcgcccagatc
atctcctctgtctcgggggctccagacctactcaagagggagccagataacaaggctcct
gccgccctcaacggcctccagacagaaccggaccgtccagctgggggtgacaacagctca
gaaacatcgatggaagagctccccctagagggcttgtccagaaagcgcactagaaagaag
ccagtgagccaggccaagactatggcacctgcatgtgtgtccacgctcgagcagaacaca
ggcagtggcttggacctggaatccagtggtgagttcgccagcgtggagaagatgcttgcc
accaccgacgctaacaagtttagcacctacctgcagacgggggcggcggagctgggaagg
cgaaacgaggggagacagagcccgggagaggagaaggaagagaaagagtcaccacctcag
tctgtgccgccccagtccaaaggagggaagaagaatgcctactccaactcagtgcagaag
atgacctgtcccttctgcccccgggtcttcccctgggccagctccctgcagagacacatg
ctcacacacactgtcttctctaatgtgctgtcggctacaggtcagaagcccttcccctgt
cccaaatgtgacgccttcttctccaccaagtccaactgtgagcgccacctgctgcgcaag
cacggcgtgaccaatcgctctctgcgccgcaacggccaagtatccaagaacggcgatgag
ggttcacacgacagcgcagagagttccgagaatgagcagactgcaggagaggttttggat
ctgagcagcatggaccctgatcagaaaggcgacgcatacgagtcgccaaacgcagaccaa
acaccagacatagctgagcagctgctaggggagatagaaccgcaacctagcaacaacaaa
accaacaacaattatgaaaatgaagactatgatgacaatgattcacagagcaacaagagc
ttggacctcaacttcgccagcaagctcatcgacttcaagttctcgtcggatggcgagcag
cctcagacctccctgggtggagaaagggtggtggtggccgagccggagagggtgattgac
gtccagcagcaggaccaagagtcctccaagtacacctgcaagaactgcaagaagaacttc
cgctacgccgccaccctggctcgccatgagaaggctcacctttgtgagagtgcacccccc
gaagaggcttgtggaacggaggggaccgtgccaggcacagagctccccaatgctactaca
gccaccaccgaggaggaggatcaggaggaggagggagagaaggaggctccggaaagcgag
ggagcgggaagtgtgatggacagcggctcggaggaggaggagaaagagaaggaggagagg
agcgatgaggaggggggcttggcagaaccaaagaacggagaaggagaggtgggaagaggg
tcgggaagcaaagcagacaagaggaagaagatctgtaacgtgtgcagcaaacgcttctgg
tcactgcaggatctgacgagacacatgcgctcgcacacaggcgagagaccctacaagtgc
cagacgtgtgagcgcaccttcaccctgaagcacagcctggtgaggcaccagcggatccac
ctgaagccgcggggcagcgatggcgctgatgccaacggggcagaggccccggccggagac
tcggctagcgaggagggagagtgcaccccaaccagcacatgtcctccttcagagaacgag
agcgagggcactggagtggccagggagggagctgagaaagaggcccctctaccaggctcc
acatccccggaccagtccctgtccaccactgaaccagcccagtctgagtcagctacggag
gcagtggctgagctgctcattaagccagcctcggaaccaggctcggaacctgttctgggc
ccatctgtagaacaggcctcggacaacgtctctgaaatagctgtagaactagctgctgta
gaatcagcctctataacagctagtaatacagccactgaaccagcaacagaaacccccaaa
gaatcctccacagagtcccccaccccacagccctctgatgtaaccccagagaaagaccca
gagggcccatcggaaggcttcatccaaggcctactggagatccacaccaagcctccccgg
gagttcaccctacctgccggcgaggctcccttggtgggcgtggagtga
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integrated database retrieval system
