Oncorhynchus tshawytscha (Chinook salmon): 112235871
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Entry
112235871 CDS
T05605
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112235871
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112235871
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
112235871
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
112235871
NCBI-ProteinID:
XP_042162917
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Position
LG26:29643481..29655289
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AA seq
590 aa
AA seq
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MAVHAEGIVAIVIFYLLILAVGIWAAWKNKNSGVSEGQDRSETIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPDYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQIYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIVDIDINMSVVISALIAIFYTLV
GGLYSVAYTDVVQLFCIFLGLWVSVPFALSNPAVSSISVTAKEAVYQTPWLGKIDSADTW
MWIDNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFIAAAGCLVMAVPSVLIGAIGAST
DWNQTTYGAIPPKEKDQSDMILPIVLQHLCPPWISFFGLGAVSAAVMSSADSSILSASSM
FARNIYKLAFRQSATDREIVWVMRITIFVFGAVATAMALLTGTVYGLWYLSSDLVYVIIF
PQLLSVLFIKGTNTYGSVAGYIFGLLLRIGGGEPYLKLPPFIYYPGWVQQEKIHHLTGDV
EYFIQQRFPFKTVSMLASFLGNVAFSYLLKYLFESGTLSHKYDFMDAVVSKHSKEIMDKT
TLVSNDNIILSEMAPVKTHLSTSLAGAFTNTEALSDDEESSPESLNNDQE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggccgtccacgctgaggggatcgtggctatagtgatcttctacttgcttattctggcc
gtggggatatgggccgcgtggaagaacaaaaactcaggggtgtcggagggccaggaccgc
agtgaaaccatcatggtgggcgggagggacattgggttgttcgtcggtggattcaccatg
acggctacatgggtgggcggaggctacatcaacgggacggcagagtatgtctacctgcct
gactacggccttgcctgggcacaggctccctttggatacgccctcagtctggtagtaggt
ggcctgttctttgccaagcccatgcgctccaggggttacgtcaccatgctggacccgttc
cagcagatatatgggaagcgcatgggggggctgctcttcattcccgcgctcatgggggag
atcttctggtctgccgccatcttgtcagccctgggagctactctgagtgtgattgtggac
attgacatcaacatgtcggtggtgatctcagccctgatagccatcttctacaccctggta
ggaggcttgtactctgtggcctacactgacgtggtgcagctcttctgtatcttcctggga
ctgtgggtcagtgtgccgtttgccctgtccaacccagcggtgtcaagcatcagtgtgaca
gctaaagaggctgtgtaccagacaccctggctgggtaagatagactcagcagacacctgg
atgtggatcgacaacttctgtcttctgatgttgggggggattccgtggcaggtgtatttt
caacgggttctctctgcctcttcagctacgtacgcccaggttctgtccttcatcgctgcc
gctggttgcctggtcatggctgtcccctccgtcctcataggagcgataggggcctccaca
gactggaaccagactacatacggggcaattcctcccaaagagaaggaccaatcagatatg
atcctgcccatcgtgctgcagcatctgtgcccaccctggatctccttctttggtctgggg
gcggtgtctgccgctgtgatgtcatcagcggactcctccatcctttcagccagttcaatg
ttcgccagaaacatctacaagctggccttcagacagtctgcgacagaccgtgagatcgtg
tgggtgatgcgtatcaccatctttgtgttcggagctgtggccacggccatggcgttgctc
acagggacagtatacggcctgtggtacctgagctccgacctggtctatgttatcatcttc
ccccagctgctcagcgtgctcttcatcaaaggaaccaacacgtacggctcggtggccggc
tacatcttcggtctgctgctgcgtatcgggggaggggagccctacctcaaactacccccc
tttatctactaccccggctgggtgcaacaggagaagatccaccacctgactggagacgtg
gagtactttatccagcaacgcttcccctttaaaacggtctccatgctggcctccttcctg
ggtaacgtggccttctcctacctgctcaagtacctgtttgagtctgggactctgtctcat
aagtatgacttcatggatgctgtggtgtccaaacacagtaaggagatcatggacaagacc
acgttagtcagtaacgacaacatcatcctgtcggagatggcgccggtcaaaacgcacctc
agtacctcactggccggggcgtttacaaacacagaggctctcagtgacgacgaggagtcc
agccccgagtccttaaacaacgaccaggagtag
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