Oncorhynchus tshawytscha (Chinook salmon): 112236218
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Entry
112236218 CDS
T05605
Name
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 3
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00512
Mucin type O-glycan biosynthesis
otw00514
Other types of O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
112236218
00514 Other types of O-glycan biosynthesis
112236218
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112236218
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
112236218
Glycosyltransferases [BR:
otw01003
]
O-Glycan biosynthesis
Mucin-type
112236218
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
Glyco_tranf_2_2
Glyco_tranf_2_3
DUF6287
Motif
Other DBs
NCBI-GeneID:
112236218
NCBI-ProteinID:
XP_024260569
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All DBs
Position
LG03:43132278..43148671
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AA seq
625 aa
AA seq
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MSGLRRVFRRRLHPLKLVIVALTFVTFLFLIQREVVSQSPTQEEPWLKEIAVKRDAVLGM
VMGAVNNFRDAMPKMQIRAPVRQQETAGDFSCLSGTYTAAELRPVLERPPQDPNDPGASG
KPFHTDKLSPAEQKEKDRGEEKHCFNLYASDHISLSRDLGPDTRPPECIEQTFKRCPPLL
TTSVIIVFHNEGWSTLLRTVYSVLHTSPAIFLKEIILVDDASVDDALKEELDEYLKRLHI
VRVVRQRERKGLITARLLGASVATGDILTFLDAHCECFNGWLEPLLARIAENYTAVVSPD
ITTIDLNTFEFMKPSPYGQNHNRGNFDWGLSFGWESLPDHEKQRRKDETYPIKTPTFAGG
LFSISKDYFYLIGSYDEQMEIWGGENIEMSFRVWQCGGQLEIIPCSIVGHVFRTKSPHTF
PKGTQVIARNQVRLAEVWMDDYKEIFYRRNQQAAQLAKDRAFGDVAQRVDLRERLQCKSF
SWYLKNVYPEVFMPDLNPLHFGSVKNVGKDSCLDAGENNEGGKRLILYPCHGLGGNQYFE
YSTHHEIRHNIQKELCLHGTEADVKLEDCQYKGRITFVGAEQKWELRENQLFFIPGWNRC
LSARHEHPSLVACNPSDRYQLWLFV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtctccgcagagttttccgaaggcgattacaccccttgaaactggtgatagtg
gcccttacctttgtcacatttttgttccttatacaacgtgaggtagtaagccaaagtccc
acacaagaagagccctggctgaaggagatagcggtcaagcgggatgccgtgctgggcatg
gtgatgggggccgtcaataacttcagggatgccatgccaaagatgcagatcagagcccca
gtgcgccagcaggagactgcaggggacttttcctgtttgtcagggacgtacacggctgct
gagctgaggccagtcctagagcgtccacctcaggaccccaacgaccccggagcctctggg
aagccctttcacacagacaaactgagccctgctgaacagaaggagaaggatcggggagag
gagaaacactgctttaacctctacgccagtgaccacatctctctcagccgtgacctgggc
cctgacaccagaccaccggaatgtatcgagcaaacattcaagcgttgtccacccttgctg
accaccagcgtgatcattgtgtttcacaacgaaggctggagtactctgctgaggacggtg
tacagcgtcctccacacctcccctgccatcttcctcaaggagatcatcctggtggacgat
gccagtgtggatgatgcattgaaagaggagctggatgagtatttgaagcggctgcacatt
gtgcgcgtggtacgtcagcgggagagaaagggcctgatcactgctcggctgctgggagcc
tctgtggccactggagacatcctcaccttcctcgatgctcactgtgaatgcttcaatggc
tggctggagcctctactggccaggatagcagagaattacactgcggtagtgagtcctgac
atcacaaccattgacctcaacacctttgagtttatgaagccctcgccatacggacagaac
cacaaccgtggtaactttgactggggcctgtcctttggctgggagagtctaccggaccac
gagaaacaacggagaaaggatgagacttatcctatcaagacaccaacttttgctggggga
ctcttctctatctccaaggactacttctatcttatcggaagctatgatgagcaaatggaa
atctggggaggggagaatatcgaaatgtctttcagagtgtggcagtgtgggggtcagcta
gaaataatcccttgctccatcgtgggtcatgtgttccgcaccaagagtccgcacaccttc
cccaagggcacccaggtgatcgcacgcaaccaggtgcggctggccgaggtctggatggat
gactacaaggaaatcttctaccgacgcaaccaacaagctgcacagctggccaaagacagg
gccttcggagatgtcgcgcagcgtgtggacctccgggagcggctgcagtgcaagagcttc
tcctggtatttgaagaacgtgtatccagaggtcttcatgcccgatctcaacccactccac
tttggctcggtgaagaatgtaggtaaagactcgtgtctggatgcaggggagaacaacgag
ggagggaagcggctgatcttgtatccatgccacggactcggaggaaaccagtattttgag
tactcgacccatcacgagatccggcacaatattcagaaggagctgtgtttgcatgggacg
gaggcagacgtgaagctggaagactgccagtataaaggccgcatcacatttgtaggagca
gaacagaagtgggagttaagggagaaccagttattcttcatcccaggatggaatcggtgt
ctgagtgcccgtcatgagcacccctccttggttgcctgtaacccctcagacagataccaa
ctgtggctctttgtctga
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