KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112236919
Entry
112236919         CDS       T05605                                 
Name
(RefSeq) tumor necrosis factor ligand superfamily member 10
  KO
K04721  tumor necrosis factor ligand superfamily member 10
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060  Cytokine-cytokine receptor interaction
otw04068  FoxO signaling pathway
otw04210  Apoptosis
otw04217  Necroptosis
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    112236919
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    112236919
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    112236919
   04217 Necroptosis
    112236919
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112236919
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112236919
   04052 Cytokines and neuropeptides [BR:otw04052]
    112236919
   04090 CD molecules [BR:otw04090]
    112236919
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   112236919
Cytokines and neuropeptides [BR:otw04052]
 Cytokines
  Tumor necrosis fators
   112236919
CD molecules [BR:otw04090]
 Proteins
  112236919
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 112236919
NCBI-ProteinID: XP_024261304
LinkDB
Position
LG16:complement(17823677..17835141)
AA seq 354 aa
MTQVMFLFLTVALPAPPSLFPSPPSTSLFLCGRKGGRSYSYSLFTAFVLKPERSRAGREA
VVGMAGGSSGFTFLGVLLLAAILLQTVAVTVTVLYFTNVLNTMKETFARSSVSCLTRSDL
RGGYVRSPIEGRGDPCWQVTQQLHTLIEKSLFQRYQREISSAVRDEMSRVMPSLAMEDQA
SSRPKVAAHVTGSFAPKAPREGGGSAGRRVQGQKISWWEGHKGLAFLQDVRLIDGELVVP
CPGLYYIYAQTYFRHTHPGGEEGEEEVEEEREQRGRPMLQYVYKKVSSYPVPILLMKTSR
TSCWSRDSQFSLHSAHQGGLFPLATGDRLLVTVSNASAIDMDERSSFFGAVLVS
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgactcaagtcatgtttttgttcttaaccgtggccttgcctgctcctccctctctcttt
ccctctcctccctctacctctctctttctgtgcgggaggaaggggggcagaagttatagt
tactctctcttcacagcttttgttctgaaaccggagcgtagcagagcagggcgcgaggcg
gtggtcggtatggcgggaggctcgagcggcttcacatttctcggggttctgctgctcgcg
gccattctgctgcagaccgtggccgttaccgtcaccgtgctctacttcaccaacgtcctc
aacacgatgaaggagacatttgcaaggagcagtgtgtcttgtctgacacggtctgacctc
agaggggggtatgtgcgctccccgatcgaggggagaggagacccctgctggcaggtcaca
cagcaactacacaccctcatagagaagtctctgtttcagcgatatcagagggagatctcc
tcagcagttagagacgagatgtccagggtgatgccctcactggcaatggaggaccaggct
tcttctcgccccaaagttgccgcccacgtcactggcagcttcgctcccaaagcaccgagg
gagggaggaggttctgccgggcggcgtgtgcaggggcagaagatctcgtggtgggagggg
cataaagggctggcattccttcaggatgttcgattgattgatggggagctggtggtgcct
tgcccaggactctactatatctatgcccagacctacttcagacacacccaccctggggga
gaggagggggaggaagaggtggaagaggagagggagcagagggggaggcccatgttgcag
tatgtttataagaaagtgtcttcctatccggtacccatcctgctaatgaagaccagccgt
acctcctgctggtcccgggattcccagttctctctacactcggcccaccagggagggctg
ttcccattggccacaggggaccgcctcctcgtcaccgttagcaacgcctctgccatcgac
atggatgagaggagcagctttttcggggctgtcctggtcagctag

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