Oncorhynchus tshawytscha (Chinook salmon): 112236979
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Entry
112236979 CDS
T05605
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 1 isoform X1
KO
K17477
FERM, RhoGEF and pleckstrin domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112236979
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112236979
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_N
FERM_M
FA
SOS1_NGEF_PH
PH_13
RHG20_PH
IQ_SEC7_PH
PH_MRCK
Motif
Other DBs
NCBI-GeneID:
112236979
NCBI-ProteinID:
XP_024261367
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All DBs
Position
LG03:complement(45349685..45431495)
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AA seq
1042 aa
AA seq
DB search
MMEPEHRASAAQRLGAQETLGISTLDPGHRPPTMPPGRHVSIKIRMLDDTEEVFDVSQRA
SGKVVFDLVCTHLNLVEGDYFSLEYQDHHKMMVWLDLLKPIVKQLRRPKHTVLRFVVKFF
PPDHTQLLEELTRYLFALQVKHDLACGRLACNDSSAALLVSHIIQSEIGDFEESQSRQHL
LNNSYIPDQVALIDRIMEFHSKNVGQTPAESDYQLLEVARRLELYGVRLHPAKDREGSKL
SLAVAHTGVLVFQGHTKINAFNWSKVRKLSFKRKRFLIKLRPDLNQSSYQDTLEFLMGSR
DCCKVFWKICVEYHAFFRLFEEPKPKPKPVLFTRGSSFRFSGRTQKQVIDYVKDSEFKKI
PFERKHSRVQHSSSRLSPLPSPHRPQVPKEVSVSFESVSRAPGDIVDSPPRRHWKESVLV
SAEDPSALRTRSSPSSQRNGAHSEERPGPGAEPGPARQPHPEHLNTAGVVSNSPHLSASS
GNSQGMVNGQKPVELCGHSPDGRQPSPLTSPLLNDAGSVRTDDEDEVRRKRFPTDKAYFI
AKELLTTERTYLKDLEVVTVSFQNLVGKDEAAPDSLKSTIFSNFDPLYKFHSGFLREVEQ
RLALWEGRSNAHIKGDYQRIGDVMLKNLQGLKPLTAHLQKHSEALVELEKACRGSRRLEV
LVRDFELQKVCYIPLNVFILRPLHRLLHYKQILERLCKHYPPTHVDFRDCRAALADVSEV
VAQLHGSMIKMENFQKLLELKKDLIGIDSLVTPGREFIRLGCLSKLSGKGLQQRMFFLFN
DVLLYTSRGMTATNQFKVHGQLPLHDMTIRESEDEWGVPHAFTLVGQRQSVVVAASSLSE
MEKWMEDIKMAIDLAETSNGHTADLLARSLTDNKSTTEDSCAEAESEDDLMASRTSLERQ
APHRGNTTVHVCWHRNTSVSMVDFSIAVENQLSGNLLRKFKNSNGWQKLWVVFTNFSLFF
YKTHQDDYPLASLPLLGYSVTIPTESENIHKDYVFKLHFKSHVYYFRSESEYTFERWMEV
IRSATVSASSTRILSRKEPHPY
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcccgagcacagagcatcagcagcccagcgtcttggagcccaggagaccctg
ggcatcagcaccctggaccctggccaccggcctccaacaatgccccctggacgccacgtc
tccattaagatacgcatgttggacgacacagaagaggtcttcgacgtctcgcaaagagcc
tctggcaaggtggtgtttgacctggtgtgtacccacctgaacctcgttgaaggggactac
ttcagcctagagtaccaagaccaccacaagatgatggtttggctagacctccttaagcca
atagtcaagcagctgagacggcccaagcacacagtcctgcgatttgtggtgaagtttttc
ccccctgaccacacccaactactggaggaactgactaggtacctcttcgccctgcaagtc
aagcatgaccttgcctgtggacgtctggcctgcaacgacagtagcgcggccctgctggtc
tcccatattatccagtctgagattggggattttgaggagagccagagtcggcagcacctc
ctcaacaacagctacattccagaccaggtggctctgatcgacaggatcatggagttccac
tccaagaatgtgggtcagacgccagcagagtcggactaccagctgctggaggtggcacgc
aggctggagctgtacggagtgagactgcatcctgccaaggaccgcgagggcagcaagctg
agcctggccgtggcgcacacgggtgtcctggtctttcagggacacaccaagatcaatgcc
ttcaactggtccaaagtgcgcaaattgagcttcaaacggaagcggtttctcatcaagctc
agaccagacctgaaccagagctcttaccaggacactctggagttcctgatgggtagcagg
gactgctgtaaagtcttctggaagatctgtgtggaataccacgcctttttccgcctcttc
gaggagcccaaacccaaacccaagcctgtcctcttcacccgaggctcctccttcagattc
agcggtcggacccagaagcaggtgattgattacgtgaaggattctgagtttaagaagatt
ccctttgaaaggaaacacagcagggtccagcacagcagcagccgtctgtctccactgcct
tccccgcaccgccctcaagtgccaaaagaagtcagtgtctccttcgagagtgtgagccgt
gctccaggagacatagtggactctccgccacgccgtcactggaaggagtccgtgttggtg
agcgccgaagacccatcggccctgcggaccagaagcagcccctccagccagaggaatggg
gcacacagcgaggaaaggccaggccccggggcagaaccaggcccagccaggcagccccac
ccagaacatctgaacacagcaggagtggtgtccaacagcccccatctctccgcctcctcc
ggtaactcccagggcatggtcaatggtcagaagccggtcgagctctgtggtcacagtccg
gacggtcggcagccctccccccttaccagccccctgctcaacgatgccggaagcgtgcgc
accgacgatgaagacgaggttcggaggaagagattccccaccgacaaggcctactttatt
gccaaggagctgctgaccacagagagaacctatctgaaggacctggaggtcgtgactgtg
tcttttcagaacttggtgggtaaagatgaagctgcaccggactccctgaagagcaccatc
ttctccaactttgaccctctgtacaagttccactccggcttcctcagagaggtggagcag
agactggctctatgggaagggcgctccaatgcccacattaaaggagattaccagcgcatc
ggtgatgtcatgctgaagaatctacagggcctgaagccgctgactgcccacctccagaag
cactcggaggccctggtggagctggagaaggcatgccggggctcccggcggctggaggtg
ctggtccgggactttgagctgcagaaggtgtgctacatccctctcaacgtgttcatcctc
aggcccctgcaccgcctcttgcattacaagcagatcctggagcgtctgtgcaaacactac
ccccccacacacgtggatttcagggactgcagagccgcgctagcggacgtgtcagaggtg
gtggcccagctccacggcagcatgatcaagatggagaacttccagaagcttctggagctt
aagaaggatttgattggcatcgacagtctagtcactccagggcgggagttcatccggcta
ggctgcctcagcaagctgtctggcaaaggcctccagcaacgaatgtttttcctgttcaat
gacgtcctcttgtatacgagtcgagggatgacggcgacgaaccagttcaaagtgcatggg
cagctccctctccatgacatgacaatccgggagagcgaggacgagtggggtgtgcctcac
gccttcactctggttgggcagcgtcagtcagtggtggtagcagctagttccctgtcagag
atggagaagtggatggaggacattaagatggccattgacttggcagagaccagcaacggc
cacacggctgacctgctggccagaagtctgactgataacaaatccacaacagaggactcc
tgtgcggaggcggagtctgaggacgacctgatggcgtcacgcacctccctggagaggcag
gcccctcaccgtggtaacaccacggtgcacgtgtgctggcacaggaacaccagcgtgtcc
atggtggactttagcatagctgtggagaatcagctgtcaggaaacctgctgaggaagttc
aagaacagcaacggctggcagaaactctgggtggtcttcaccaacttcagcctgttcttc
tacaagacccaccaggatgattatcctctggccagtctccccctgttgggctactcggtc
accatccccactgagtctgaaaacatccacaaggactatgtcttcaaactgcatttcaaa
tcccacgtctactacttcagatctgagagcgaatacacttttgagaggtggatggaggtc
attcgcagtgccaccgtctctgccagcagcacccgcattctgagccggaaagagccccat
ccatactga
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