KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112237142
Entry
112237142         CDS       T05605                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit-like isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112237142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112237142
Spliceosome [BR:otw03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112237142
 Complex B
    112237142
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 112237142
NCBI-ProteinID: XP_042168951
LinkDB
Position
Unknown
AA seq 248 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGIRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPVHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRDLYGRRRKGKGGGGGGGGGGHRSRSRSRERRSRSRDRGRGGDGGRGGGRDREKRRSR
DRERSGRF
NT seq 747 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcctccattttcggaacagagaaagacaaggtcaattgttcattc
tactttaaaattggagcgtgcagacatggggaccgctgctctaggttgcacaacaagcca
actttcagccagaccattgccctgttgaacatttaccgtaaccctcaaaacactgcccag
tctgccgatggtatacgctgtgccgtcagcgatgtggaaatgcaagagcactatgacgag
ttctttgaggaagtcttcacagagatggaggagaagtacggagaggtggaggagatgaac
gtgtgtgacaaccttggcgaccacctggtcggcaacgtctatgtgaagttccgtcgggaa
gaggatgcggagaaagcggtgatggacctgaacaaccgctggttcaacggtcagcctgtc
cactcagagctctcccccgtcactgacttcagggaagcctgctgtcggcagtatgagatg
ggagagtgcaccagaggaggcttctgcaacttcatgcacctgaaacccatctccagggaa
ctccgtcgggacctgtatggacgccgcagaaaaggcaaaggaggaggaggtggtggagga
ggaggaggacaccgctctcgctcgcgatcccgggaaaggcgttctcgctcccgagaccgt
ggccgtggtggcgatggtggaagaggtggcggacgagaccgcgagaaacggaggtccagg
gaccgggaacgttctggaaggttttaa

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