Oncorhynchus tshawytscha (Chinook salmon): 112237626
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Entry
112237626 CDS
T05605
Name
(RefSeq) integrin beta-4-like isoform X1
KO
K06525
integrin beta 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04382
Cornified envelope formation
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04518
Integrin signaling
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112237626
04518 Integrin signaling
112237626
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112237626
09142 Cell motility
04820 Cytoskeleton in muscle cells
112237626
04810 Regulation of actin cytoskeleton
112237626
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112237626
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112237626
04515 Cell adhesion molecules [BR:
otw04515
]
112237626
04090 CD molecules [BR:
otw04090
]
112237626
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112237626
Exosomal proteins of bladder cancer cells
112237626
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin beta subunits
112237626
CD molecules [BR:
otw04090
]
Proteins
112237626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
PSI_integrin
EGF_Teneurin
FN3_DSCAM-DSCAML_C
EGF_2
I-EGF_1
EGF_integrin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
112237626
NCBI-ProteinID:
XP_042161508
LinkDB
All DBs
Position
LG24:complement(25368053..25400781)
Genome browser
AA seq
2053 aa
AA seq
DB search
MGRWTLHFLVGVVLAVLTASSYAEKVNHCLAARANTCSACIQSGKGCAYCPDEIFDGPRC
DLLENIIDHGCNGAVTAEGSISMERNQKIDMLMKRSQVAPQDMSMTLLPGEEREIEMEVF
EPAKGPLDLYILMDFSNSMKDDLDNLKRMGAELADLVGKLSDDYTIGFGKFVDKVVEPQT
DMRPIKLAQPWPNSDPPFSFRNVITLTPDLQSFTQKLQKERISGNLDAPEGGFDAILQAT
VCGEKIGWRDHATHLLVFSTESAFHYESDGANVLAGIMPRNDEQCHLDPDGKYTEDTRQD
YPSVPTLVRLLGKHNIIPIFAVTNHSFTYYEKLHEYFPIAELGLLQEDSANILNILEKAF
ENIRSKISIRAEDRPKAIEAQVLSYSGNVAQAGTFKVKPGQIGKFKVRVKASEMVGEQHV
CSLEQGDKKGKMRVKPTTFSTALNINAEVLCKTCDCEKNPFRNAVRCTGHGDLVCGKCKC
NDGWLGPFCNCSASASTDPGTSCLGPGVEEPCSGRGDCLCGACVCYNTDQYEGSLCQFDK
SQCQRYGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGVCNGRGVCKCGR
CECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSDKCDQCQFKVVMVEE
LKENKEVIEACSFRDEDDDCTYHYTVDYPEDQTVKELEVQVLKKKDCPPAGFLWLIPLIM
FLMLLLGLLSLCCWKYCACCKSCLALLPCCGRGRMVGFKENQYMLRQSMLTSDHLDTPLV
RTGPPKSTDVVRWKITDNVHRSPNHPLAQVQPNPKETIQFPLSLRLNRLFTDSLSRSDAR
DTELLRREVDDNLNEVYKQVPGTQRVQNTTFRLQRNAGKRADHAIVDTVLPAPRSSYPNI
VKLTEKNVQSGNFQDLKVVPGYYTVATDREAAGAVEFQEGVETVDVHVPLFVKEEDDDKK
QLQVEAVDVPLGIAEIGKRFVSITIIKEHAKSVMSFLQPSYTYSRQDKVANIPITREIIE
DGHAQVSYRTRDLTAKDKKDYVTVDGELSYGPGETQQTVPVRLLEMGEGDGLLKDTQVKQ
FVMDLSNPRQGAKLGRYPRTTVTITDKPEPSVMMFMKSTQNFSTADPTYSIPVVRTRNKE
GPATVHWRTRNAKRFELSGPLKFGPGETEKNIVIDPRSHPGPVKPESFQLELFDPSTKAV
VGERKTTMVTITDGGLPENAQMEKSAGFINQTATSPGGRLNSPTNVKAKATGPRSIRLNW
DPLGKSLGYKVKYWIYGDPEADAPPAMNVKTNHADLANLYPYCDYETKVCGYNALGDGNY
SDMVPCKTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITAYEVLYTPINDDTKPM
GAAKKVKIDNPKKRMLLIENLQSAQTYCYQVRAKNSVGWGPFKEATINLASQPTRPMSIP
IIPDIPIVDAEAGDEYDGYLMYSSEVMRSPTDSKRPSVSDEGFIKLVGSKLDLRSVSWKR
HVDVIPYHLSTDTETSSDETPRPSRTQIPHQEPINGRLEQNFLFPGGNNSMSRSTNMSSS
SYSQVSPMSTLSSSHRGGAGGSMSMESTTTYLSGQGGNSLSRTQVIGGGTRTENVVMRKR
SENRGYYEYDDNIRDSIIIGDLSSGLSGYTDGQSTYGFSPTQTQSQYDYGMSQAFRARTQ
SEDVNDALQNLDRVIQDARLAPGVPDTPTRLVFSALGPTALKISWQEPHCDRDVLGYCVL
YQLLNGGDVKRINMSSPADNSVVVQDLLPNHSYLFKVKAQSQEGWGPEREGVITIESAVD
PNSPLSPMPGSSFTLSTPSAPGPLVFTALSPEALQLSWEKPRKPNGDILGYVVTCEHLHG
GGDMRSFQVSGDSAETSLTVPDLSENMPYKFKVQARTTQGFGPEREGIITIESQDDGSMS
QLGGLGGTSQLGGLGSMSQLGGLGSMSQLGGLGSMSQLGGLGGTSQYSSQSLTKRDVYQL
PTEGSTHTNVTHTMINDPYYSGDGMMVVGKTTQHTETSGMVTRHVTKEVVQRSMQVAGTS
SVTKKVERSFYET
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatttcttggtgggggttgtacttgctgtcctcacagccagt
agctacgctgaaaaagtaaaccactgtctggctgcaagggctaacacctgttcagcatgt
atccagtccggaaagggctgtgcctactgcccagacgagatctttgatggaccccgctgt
gaccttctggagaacatcatagaccacggctgtaatggcgcagtaacggccgaaggcagt
atatcaatggagagaaaccagaagattgacatgttgatgaagcgctctcaggtggccccc
caggatatgtccatgactctgctgccgggggaggagagggagatcgagatggaggtgttt
gaaccagcgaaaggacctctggacctctacattctcatggacttctccaactccatgaag
gatgatttggacaacctcaaaaggatgggtgctgagctggctgacttggtggggaagctg
tctgatgattacaccatcggtttcggcaaatttgtggacaaggtggtggagccccagaca
gacatgagaccgatcaaactggcccagccgtggcccaacagcgaccctcccttctcgttc
cgaaatgtgatcactctgacccctgacctgcagtccttcacccagaagctgcagaaggag
aggatctcaggcaacctggatgctccagaggggggcttcgacgccatactgcaggctaca
gtctgcggggaaaagatcggctggcgtgaccatgccacccaccttctggtcttctccacc
gagtcggccttccactacgagagtgacggtgccaacgtgctggctggcatcatgccacgc
aatgacgagcagtgccacctggaccccgatgggaaatacacagaggacaccaggcaggac
tacccttctgtgcccaccctggtccgcctgctgggcaaacacaacatcatccccatcttt
gccgtcaccaaccactccttcacctactatgagaagcttcatgagtatttccccatcgct
gagctgggcctgctacaggaagactccgctaacatcctcaatatcctggagaaagctttt
gagaatatccgttctaagatcagcatccgtgcggaggacagacctaaagctatagaagct
caggtcctgtcttacagtggcaatgttgcacaagctggaaccttcaaagtcaagcctggg
caaatagggaagtttaaggtgcgtgtcaaggccagtgagatggttggggagcaacatgtg
tgtagtctggagcagggtgacaaaaaggggaagatgagagtcaaaccgacaaccttcagc
acagctttaaacatcaacgccgaagtgctctgtaaaacctgcgactgtgagaagaatcca
tttcgaaacgcagtgaggtgtacaggtcacggagacctggtctgtgggaagtgcaagtgc
aacgacggctggctgggtccgttctgtaactgctctgccagcgcgtcgacggatccgggc
acttcctgtctgggtcctggcgtggaggagccgtgttctggccgaggagattgcctgtgt
ggagcgtgtgtttgttacaacacggaccagtacgagggatccctctgtcagtttgacaag
tcccagtgtcaacgatacggaggtttcctctgcaacgaccgtggtcgctgcttcatgggc
cagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtcccatgagcaaccag
acctgtctggacacgaaagggggcgtctgtaacgggcggggtgtgtgtaagtgtggtcgc
tgtgagtgccaggactctggcctggccatgacccccacctgcgaggctaacttccaggcc
cagctggggatgtgtgaggacaagaggagctgtgtccagtgtcaggcctggaagaccgga
gagaagaaggacagcgacaagtgtgaccagtgccagttcaaagtggtcatggtggaagag
ctcaaggaaaataaagaggtgattgaggcgtgtagtttccgcgacgaggatgacgactgt
acgtaccactacaccgtggactatcctgaggaccagactgttaaggaactggaggtccag
gtgctcaagaagaaagactgtccccctgctggcttcctgtggctgatccctctcatcatg
ttcctcatgctactgctgggtctactgtcgctctgctgttggaagtactgcgcctgctgc
aagtcctgtcttgctttgctgccatgctgtggaagaggtcgtatggttggctttaaggaa
aatcagtacatgctccgccaatccatgctcacctctgaccacttagacacgcccctagtg
aggaccggcccacccaagagcaccgacgtggttcgctggaagatcactgacaatgtccac
cgatcgcccaatcatccgcttgcgcaggttcagcccaaccccaaagagaccatccagttc
cctctgtctctgcgtctgaacaggttgttcacagacagtctgtctcgctccgacgccaga
gacactgagttgctacgcagggaggttgatgacaacctgaatgaagtgtacaagcaggtt
cctggcacccagagagttcagaacaccacatttagattacagagaaatgctggtaaaaga
gctgaccacgccatcgtagacactgttctgcccgctcctcgctccagctaccccaacatc
gtcaaactgactgagaaaaacgtccagtctggaaacttccaggatctcaaagtggtgccg
ggctactacacagtggccacagacagagaggcggctggtgccgtggagttccaggagggg
gtggagacggtggatgtgcacgtgccgctcttcgtcaaggaggaagatgatgataagaag
cagctgcaggtggaggcggtggacgttcctctgggcatcgctgagatagggaaacgcttt
gtcagcatcactatcatcaaagaacacgccaagagtgttatgtcgttcctccagccttcg
tacacctacagccgacaggacaaagtggctaacatccccattactagagagatcatagag
gatggacacgcacaggtcagctaccgcacccgagacctcaccgccaaggacaagaaggac
tatgtgacagtggatggggagttgtcctatgggccaggggagacccagcagactgtccct
gttcgtttgttggagatgggagagggagacggtctgctgaaggacacacaggtcaaacaa
tttgtcatggacctcagtaacccaagacagggtgcaaagttgggacgctaccccagaacc
accgtcaccatcactgacaaaccagagcccagtgtgatgatgtttatgaagagcacccag
aacttctccaccgccgacccaacctactccatccccgtggtccgcacccgcaataaggag
gggcccgccaccgtccactggaggacccgcaacgccaaacgctttgagctgtccggcccc
ctaaagtttggtcccggggaaactgagaagaacatcgtgatcgatccacgctctcaccct
ggcccggtgaaaccagagtccttccaactggaactgtttgaccccagtacgaaagctgtg
gtcggagagaggaagacaacgatggtcactattactgatggaggacttccagaaaatgcc
cagatggagaagagtgcgggcttcatcaaccagacagccacgtctcctggtggtcgtctc
aactctcccaccaacgtgaaggccaaagccaccggcccccggagcatccgccttaactgg
gaccccttaggaaaatctctgggctacaaggtgaagtattggatctatggggatcctgag
gctgacgccccccctgcgatgaatgtaaagacaaaccatgctgacctggccaacctgtac
ccctattgtgactacgagacgaaggtgtgtggctacaacgccctgggagacggaaactac
agcgacatggtgccctgtaagaccctggaggatgtccccagtgagcccggtcgtctggcg
tttaacgtcatcagtccaactgtcactcaggtcagctgggcggagcctgccgagaccaat
ggtgtcatcaccgcctacgaggttctctacacgcccatcaatgacgacacgaagccgatg
ggtgcagctaagaaggtgaagatagacaaccctaagaagaggatgttgctgattgagaac
ctgcagtcggcccagacttactgctatcaggtccgggctaagaacagcgtgggttggggt
cctttcaaagaagcgaccatcaacctggcctcccagcccaccagacccatgtccatccct
atcatcccagacatccctatagtggacgcggaggcgggggatgagtacgacggctacctg
atgtacagcagtgaggtcatgagatcgccaacagactccaagagacccagcgtctcagac
gaaggctttatcaagttggtgggttccaagctggacctgcgttcggtgtcctggaaaagg
catgtggatgtgatcccctaccacctcagcacagacacagagaccagcagcgacgagacc
ccccgacccagccgaacacagataccccatcaagaaccaattaacggcaggttggaacag
aacttcctcttccccgggggaaataattccatgtcgcgcagtaccaacatgtcttcatcc
agctacagccaggtttctcccatgtccaccctcagctccagccaccgagggggggccggg
gggtccatgtccatggagtccaccacaacatacctctctggacaaggaggaaactctctc
tcccgcactcaggtgattgggggcgggacgcgcacggagaatgttgtcatgaggaagcga
tcagagaacagaggttactatgagtatgacgacaacatccgagattccatcatcatagga
gacctgtccagtggattgtctggatacacagatggccaaagtacgtatggcttcagtccc
actcagacacagagtcagtacgactacggtatgtctcaggccttccgggccaggacccag
tctgaggatgtcaacgatgcactacagaacctggacagggtgatccaggatgctcgtttg
gcccctggggtccctgacacccccaccaggctggtgttctctgccctgggccccactgcc
ctgaagatcagctggcaggagccccactgtgacagggatgttttagggtactgtgttctc
taccagctgctgaatggaggtgatgtgaagcgcataaacatgtccagccccgcagacaac
tccgtggtggtgcaggacctgctgcctaaccactcctacctgttcaaggtgaaggctcag
agtcaggaaggctggggaccggagagggagggagtcatcaccatagagtcagctgtcgac
cccaacagcccactcagcccaatgccaggttcttccttcactctcagtacccccagtgct
ccaggacccctggtgttcacagctctgtcccccgaggcactgcagctgagctgggagaaa
ccccgcaaacccaacggagacatcctgggctacgtggtcacctgtgaacatctgcacgga
ggaggtgacatgcgttccttccaggtgagcggtgacagcgctgagaccagtctgacagtt
ccggacctgagtgagaacatgccgtacaagttcaaagttcaggccaggacgacccagggc
ttcggccccgagagggagggcattatcaccatcgagtctcaggatgatggtagcatgtct
caactaggaggcctaggtggtacatctcaactaggaggcctaggcagtatgtctcaacta
ggaggcctaggtagtatgtctcaactaggaggcctaggtagtatgtctcaactaggaggc
ctaggtggtacatctcagtacagcagtcagtccttgaccaagagagatgtgtaccaactt
cctacagagggcagcacacacaccaacgtcacacacaccatgatcaacgacccatactac
tcaggagatggtatgatggtggtggggaagacaacccagcacacagagaccagcggcatg
gtgacacgtcatgtgacgaaggaggtggtgcagaggagcatgcaagtggccggcaccagc
agcgtcaccaagaaggtcgagaggtcattctacgagacctga
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integrated database retrieval system
