Oncorhynchus tshawytscha (Chinook salmon): 112238369
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Entry
112238369 CDS
T05605
Symbol
cxcl12b
Name
(RefSeq) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04672
Intestinal immune network for IgA production
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112238369 (cxcl12b)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112238369 (cxcl12b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112238369 (cxcl12b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112238369 (cxcl12b)
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112238369 (cxcl12b)
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Chemokines
112238369 (cxcl12b)
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Chemokines
112238369 (cxcl12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
112238369
NCBI-ProteinID:
XP_024262720
LinkDB
All DBs
Position
LG02:74177985..74190711
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AA seq
99 aa
AA seq
DB search
MDVKVLAVLALLAVAMDVPPSTAKPISLVERCWCRSTLNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQTYLKNAINKVKKSRRRAQ
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaagtactggctgtgttggccctactggctgtggccatggatgtacctccc
tctacggctaagcccatcagcctggtagagaggtgctggtgtcgctccactctgaacacc
gtccctcagaggagcatcagagagctcaagttccttcacacacccaactgccctttccaa
gtcattgccaagctgaagaacaacagggaggtgtgcattaaccccgagaccaaatggctg
cagacgtacctgaagaatgccattaacaaggtgaagaagtccagaagacgtgctcagtaa
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