Oncorhynchus tshawytscha (Chinook salmon): 112238933
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Entry
112238933 CDS
T05605
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112238933
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112238933
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112238933
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
112238933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112238933
NCBI-ProteinID:
XP_024263261
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All DBs
Position
LG01:complement(20239861..20265294)
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AA seq
471 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAIYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQASQELTAAREEGGEVGGHS
RAYSRGSSAALSDLDDITLPDGLLCDLPLTPEGAEREFCNLEMMGGSGGSSSSSQSSPEQ
NRLDFGDSNHHIKHEYQLLHESGLFTHALLNPLPEGFSMLEIERITASVVKSHIETSQHG
SEELKRLIWSLYTPEETRSFQSKSAEVMWQQCAIHLTNAIQYVVEFAKRITGFLDLCQND
QVILLKAGCLDVLLIRMCRAYNPINNTILFDSKFASAQTFKALGCDDLVGAVFDLAKSLS
RMQLSEEEMALFSASVLLSPDRPWLTDRQQVQKLQEKVYLALQHCLHRGGSSEEKLAKMV
SKLPMMKSICNLHIDKLEFFRLLHPETAFNFPPLYREVFSSEITFPDSTMD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagagcacaaattgaagtaataccctgcaagatctgtggggacaagtcatcagggatc
cactatggtgtaatcacctgtgaaggctgcaagggcttcttccgacgcagccagcagaac
aatgctatatactcctgttcccggcagaggaactgtctgattgaccgcaccaatcggaat
cgctgccaacactgccggctgcagaagtgcctggccctaggcatgagccgtgatgcggtg
aagtttggccgcatgtccaaaaagcagagagacagcctgtatgctgaggtccagaagcac
caggcgtcccaggagttaactgccgcccgtgaggagggaggcgaggtcggaggtcacagc
cgggcatacagcagaggctccagtgccgctctcagcgaccttgatgacatcaccctgcca
gacggcctgctgtgtgacctgcccctgacaccagagggcgctgaaagagagttctgcaat
ctggaaatgatggggggaagcgggggtagcagctcctcctctcaaagctcaccagaacag
aacagactggacttcggagacagcaaccaccacatcaagcacgagtaccagctgctgcac
gagtccggcctgttcacacacgcgctgctcaaccctctacccgagggattctccatgctc
gagattgaacgtataactgctagtgtagtaaagtctcacatagagaccagtcagcatggc
agtgaggagctgaagaggcttatctggtccctgtacacccctgaggagacacgcagcttc
cagagcaagtctgcggaggtcatgtggcagcagtgtgccatccacctcaccaatgccatc
cagtacgtggtggagtttgccaagcgcatcactggattcctggatctctgtcagaacgac
caggtcattcttctcaaagcaggatgtctggatgtgcttctgattcgcatgtgtcgtgcc
tacaaccccatcaacaacactattctgtttgatagcaagtttgctagcgcacagaccttc
aaagctcttggttgtgatgaccttgtgggtgctgtgtttgacctggccaagagcctgagt
cgtatgcagctctctgaagaggagatggctctgttcagtgcttctgttctcctgtcacca
gaccgaccatggttgacagacaggcaacaggtacagaagcttcaagagaaagtatatctg
gctctgcaacattgtctacacagaggtggctcatcagaggagaaactggcaaagatggtg
tccaagcttcccatgatgaagtccatctgtaatctacacattgacaagctcgagtttttc
cgtctgctccacccggagactgcattcaatttcccccctctgtaccgtgaggtgttcagc
agtgaaatcaccttcccagactccacaatggactaa
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integrated database retrieval system
