Oncorhynchus tshawytscha (Chinook salmon): 112239456
Help
Entry
112239456 CDS
T05605
Name
(RefSeq) guanine nucleotide exchange factor VAV3 isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112239456
09142 Cell motility
04810 Regulation of actin cytoskeleton
112239456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
CH
SH3_1
SH3_9
SH2
C1_1
PH
CDC24
LZ3wCH
zf-RING-like
C1_2
Prok-RING_1
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
112239456
NCBI-ProteinID:
XP_042164399
LinkDB
All DBs
Position
LG29:31365747..31578145
Genome browser
AA seq
841 aa
AA seq
DB search
MEYWRQCTLWLINCKVLPPDHRVTWESAQVFDLAQTLRDGVLLCQLLNNLRPQSINLKEI
NLRPQMSQFLCLRNIRTFLAACCETFGMKKTELFEAFDLFDVRDFGKVMDTLSKLSSTTI
SEQTGIKPFPSEESLEEDEDIYSHLVDLIDEKAVEDEEDLYDCVYDDEDGGEIYEDLMKA
EAVPPPLKQVETDIRSCCLTEIKQTEEKYTETLDSIEKYFMAPLTTFLSSEEMEKVFVNI
PALVKVHKTLNVAIQDSVCHRSAQNLYQIFINYKERLLIYGKYCSHVETAIIALDVICKD
REDVRMKLEECAKRANHGKFTLRDLLVVPMQRVLKYPLLLQELVKHTHDAGDKSNLRMAL
DAIKDLAQYINEVKRDNETLRDIAQYQKSIENLNQSLSVYGRPKGDGEVRFASGDKRAKQ
DRHIFLFDAAVILCKRRGDNYEMKEVITLYHFKITNNPTSDKETRKWSYGLYLAHDQGQS
GFEFFFKTKELRKKWLEQFGMAISNIRPENGTSNSHEFKMHTFDRITSCSYCHMLLRGIF
NQGYLCSKCGIGAHKECLGRFGGCGKTDPGALKTQEKPVHGRRSDPGLPKMLVTRSYFGV
PSPMCGPPLNIQQGDIIELVCADLHSTWWQGKIVKTRAVGFFPSSAVKPYPCVPKPVDYS
TQPWFAGPMERLQAEAELISRGNSTYLVRHRSRELTEYAISIKYSNDVKHIKILNRDGCF
HIAENNKFGSILELIEYYQHYSLREGFRSLDTTLQFPYREQESPAAMLCTNKPGGKMFTP
KVIGVAKARYDFSSRDTRELSLQEGDVVKIYTKSGANGWWRGEVNGRVGWFPSTYVEEGE
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggagtattggaggcagtgcacattgtggctgatcaactgcaaggtgcttccacccgac
catcgggtaacatgggagtctgctcaggtattcgacctggctcagaccctccgagatgga
gtgctcctgtgtcaacttctcaacaacctccgaccccagtccatcaacctcaaagagatc
aacctccgacctcagatgtcacagttcctgtgcttgaggaacatccggacgttcctcgct
gcgtgctgtgagacatttggcatgaagaagactgaactctttgaggccttcgacttgttt
gatgtgcgggactttggaaaggttatggacacgttgtccaaactgtccagcacaacgatt
tcagaacaaactggtataaagccttttccttcagaggagagtctagaagaagacgaagac
atctatagccatctggtggatctgattgatgagaaagctgtggaggatgaagaggatctg
tatgactgtgtctacgatgatgaagatggtggtgagatctacgaagatctgatgaaggct
gaggctgttcctcctcctctgaagcaggtagagacagacataaggagctgctgtctgaca
gagatcaagcagactgaggagaagtacacagagactctggactccatagagaagtatttt
atggcacctcttaccaccttcctgtcctcggaggagatggagaaagtgtttgtcaacatt
ccggctctggttaaagttcacaagactctgaatgtggcgatacaagactctgtctgccat
agaagtgcccagaacctctaccagatcttcattaactacaaagagaggttgctaatatat
gggaaatactgtagccatgtagaaacggccatcattgctttggatgtcatctgcaaagac
agggaagatgtccgaatgaagctggaggaatgtgcaaagagagccaaccatggcaagttt
acactgagagatctgctggttgtcccgatgcagcgggtactaaagtatccccttcttcta
caggaattagtgaaacacactcacgatgcgggtgacaagagcaatttgcggatggccctg
gatgccataaaggacctggcccagtacatcaatgaagttaagagagacaacgaaaccctg
agagacatagcccagtatcagaaatccattgaaaaccttaatcagtctcttagtgtgtat
ggcagaccgaaaggagatggagaggtacgcttcgcctcaggcgacaaacgtgccaaacag
gaccggcacatcttcctgttcgatgctgctgtgatcctctgtaagaggagaggagacaac
tacgagatgaaggaggtgatcaccctgtatcacttcaagatcactaacaaccccacgtca
gacaaggagaccagaaagtggtcctatgggctctacctagcacacgaccaggggcagagc
ggcttcgagttcttcttcaagaccaaggagctgaggaagaagtggctggagcagtttggc
atggccatatccaacatccgtccagagaacggcaccagtaactcccacgagttcaagatg
cacacctttgacagaatcacatcctgtagctactgccacatgctgctaaggggcatcttt
aaccaggggtacttgtgctccaagtgtggtattggagcccataaggaatgtctggggagg
tttggtggctgtggaaaaacagatccgggcgccttgaaaacacaggaaaaacctgtgcac
ggacggcgctcagatccaggtctacctaagatgttggtgaccaggagctatttcggcgtg
cccagtcccatgtgtggtccgcccctcaacattcagcaaggtgacatcatcgagctcgtc
tgtgctgatctacacagcacttggtggcagggcaaaatcgtgaaaacaagagcggttggc
ttctttccaagcagtgccgtgaagccgtacccatgtgtccctaaacctgtcgactactcc
acacaaccctggtttgctgggcccatggagagactgcaggctgaggcagagctgattagc
agaggcaacagcacttacctggtccgccaccggagccgcgagctcacagagtacgccatc
agcatcaagtacagcaacgacgtgaagcacatcaagatcctgaacagggacggctgcttt
cacatcgcagagaacaacaagttcgggagtatattagaactgattgagtactatcaacat
tactccctgagggaaggcttccgaagcctggacaccacactgcagttcccctacagagag
caggagagccctgctgctatgctctgcaccaataaacctggaggaaagatgttcacccct
aaggtgataggtgtggcgaaagcccgctatgacttcagctccagggacaccagagagctg
tctctacaggagggagacgtggttaagatctacaccaagtcaggagccaatggctggtgg
aggggagaggtcaacggcagggtgggctggtttccatctacctacgtggaggaaggagag
gaatga
DBGET
integrated database retrieval system
