Oncorhynchus tshawytscha (Chinook salmon): 112241492
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Entry
112241492 CDS
T05605
Name
(RefSeq) transportin-2-like
KO
K18727
transportin-2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112241492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112241492
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112241492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
TOR1L1_N
IBN_N
HEAT_EF3_N
Vac14_Fab1_bd
TPR_IPO5
TPR_DNAAF5
HEAT_MROH2B_C
Cnd1
Adaptin_N
PDS5
MMS19_C
Ltn1_1st
HEAT_GCN1_C
UNC45-central
INTS7_N
HEAT_MROH2B_1st
Dopey_N
TPR_TTI1_C
TPR_IPO11
Caerin_1
Motif
Other DBs
NCBI-GeneID:
112241492
NCBI-ProteinID:
XP_042171258
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MEWQPDEQGLQQVLQLLKDSQSPDTATQRAVQEKLEQLNQFPDFNNYLIFVLTSLKSEDE
PTRSLSGLILKNNVKAHYQNFPPLVADFIKRECLNNIGDPSPLIRATIGILITTIASKGE
LQTWPELLPQLCNLLNSEDYNTCEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFISSRAQALMDHIDTFIESLFALAGDEDCEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDPDENVSLEACEFWLTLAEQPVCKEALSGHLVQLIP
ILVNGMKYSEIDIILLKGDVEEEDDTVPDSEQDIKPRFHKSRTVTLQHEGGEGEEGEDHD
DDDDDDDTLSDWNLRKCSAAALDVLANVFRDELLPHLLPLLKGLLFHPDWVVKESGILVL
GAIAEGCMQGMVPYLPELMPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDSHLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIEKLMPPLIAKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKTLAQAMMYSQQPDQYEAPDKDFMIVALDLLSGLAEGLGGHVDQ
LVSRSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFPHVKPCIAEFMPILGTNLNPEF
ISVCNNATWAIGEICMQMGVEMQPYVSLVLNQLVEIINRPNTPKTLLENTAITIGRLGYV
CPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAVAS
WVSPKDDLRDMFYKILHGFKDQVGEENWQQFSEQFPPQLKERLSACYGV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcagccggatgaacagggtttgcagcaggtgcttcagctgctgaaggactcc
cagtctccagacacagccacacagagagctgtgcaggaaaaactggaacagctcaaccag
ttcccagacttcaataactatctcatcttcgtccttacaagcctcaaatcagaggatgag
ccgacccgatctctaagtggtctcatattgaagaacaatgtgaaggcccactaccagaac
tttcctcctctggtcgctgacttcatcaagagggaatgtctcaacaacatcggagatcct
tcgcccctcatcagagcaaccatcggcatcttgataacaaccatagcatctaaaggagag
ctgcagacatggcctgaactcctccctcaactctgtaacctgctcaactctgaagactac
aatacctgcgagggttctttcggagcactgcagaagatctgtgaggattcttcagagctg
ttggacagcgatgctctcaacagacccctgaacatcatgatccccaagttcctacagttc
tttaaacactgcagcccaaagatcaggtctcatgccatagcgtgtgtgaatcagttcatc
agcagtagagcccaggctctgatggaccacatcgacaccttcatcgagagtctgtttgct
ctagcgggggatgaggactgtgaggtgaggaagaacgtgtgtagagctctggtcatgctg
ctggaggtccggatagaccgactcataccacacatgcacagcatcatacagtacatgctc
cagcgtacccaggacccagatgagaatgtcagtctggaggcctgtgagttctggctcacc
ctggctgagcagcccgtctgcaaggaggccctgtctggacacctggtccaactcatccct
atcctggtgaatgggatgaagtactctgagatagacatcatcctcctaaagggagatgta
gaggaggaggacgacaccgtaccagacagtgagcaggacatcaagcctcgcttccacaag
tcacgcaccgtcaccctgcaacacgagggaggagagggggaggagggggaggaccacgac
gatgacgatgacgacgatgacacgctctccgactggaacctgcggaagtgttcagcggca
gcgttagacgtgttggctaacgtgtttcgtgatgagctcctcccccacctgctgcccctg
ctgaagggcctgttgttccacccagactgggtcgtcaaggagtctggaatactggtgctg
ggggctatcgctgagggttgtatgcagggcatggttccctacctaccagagttgatgcct
cacctcatccagtgtctctgtgataagaaggccctggtgcgctccatcgcctgctggacc
ctgtcccgctacgcccactgggtggtcagccagccccccgactcccacctcaaacccctc
atgactgaactcctcaagaggatcctggatgggaacaagagggttcaggaggccgcctgc
agtgcgtttgccaccctagaggaggaggcctgtacagagctggttccctatctgagcttc
attctggatactctggtcttcgcctttggaaaataccaacacaagaacctgctcatactg
tacgacgctataggaacactggcggactccgtaggacaccacctcaaccaaccggagtac
atagagaagctgatgcctcctctcatcgccaagtggaatgagctgaaggatgaagataag
gacctgtttcctctgttagagtgtctgtcctctgtagctacagccctccagagtggcttc
ctgccctactgtgaaccagtctaccagcgctgtgttacactggtgcagaaaacactggct
caggctatgatgtacagccaacagccggaccagtacgaagcccctgataaggactttatg
atcgtggccctggacctcctcagtggtctggctgagggcctggggggccacgttgatcag
ctggtgtcccggagcaacatcatgacactactgtttcagtgcatgcaggacaccatgcca
gaggtgagacagagctccttcgccctgctgggtgatctgaccaaggcctgcttccctcac
gtcaaaccctgcatcgctgagttcatgcctatcctagggaccaatctgaacccagagttc
atctctgtgtgtaacaacgctacctgggccattggagagatctgcatgcagatgggtgta
gagatgcagccctatgtgtctctggttctgaaccagctggtagagatcatcaacagaccc
aacacacccaagaccctgctggagaacactgccattacgattggtcgcctgggctacgtg
tgtcctcaggaggtggctccgatgctccagcagttcatcagaccgtggtgtacgtcccta
cggaacatccgtgacaacgaggagaaagactccgccttcagagggatctgcatgatgatt
ggtgtaaaccctgggggagtggtccaggacttcatcttcttctgtgatgccgtggcgtcc
tgggtcagccctaaagacgacctgagagacatgttctataagatcctccatggttttaag
gaccaggtaggagaggagaactggcagcagttctcagaacagtttcccccccagctgaag
gagagactgtctgcctgctacggcgtgtag
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integrated database retrieval system
