Oncorhynchus tshawytscha (Chinook salmon): 112243600
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Entry
112243600 CDS
T05605
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112243600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112243600
03021 Transcription machinery [BR:
otw03021
]
112243600
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112243600
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
112243600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112243600
NCBI-ProteinID:
XP_042175373
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MADGGVMSQYESSGPDSIINLSVSSKSTMENGDIVKGVLTNGRDSQKQTVMSLTNAQSQA
LLQQLTLSPAQQQLFLQQAQAQLLAAAVQQHSASQAQNSSTTGAAISASAATPITTQLPL
SQPIHITPLQQQGLQQFVLVQPGHSMATQLQPQFFISQTPQGQPSMFQYHNLLQAQNLLT
QLPQSQANHLQTPTITIAPQPATPTRTVTATPGQLLIHSQTPPPKGLGTPTLEDANDLEE
LEIFSKAFKQRRIRLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLE
KWLNDAENVSSESSPSLSPLGSGHGSPSLASDLNSRRRKKRTSIDTNIRVALEKSFLQQN
QKPSSDEISLIADQLNMEKEVIRVWFCNRRQKEKRINPPSSSAFQKSIFSSPTTASLVNT
VPQTTVTVTPSLPVTSFSLTDRTLVPATSNTAPVISSTPTVPSMSLTPSSSVTTMSQPAV
TMTQAGQMLYSNGGGLAAMAAAAAGISPGLMPSSQFNTGGALLNLTTAGFGGALATIQGV
LSALASSGSFPITTLDGNGNLLFANTSMSGSAPSMVNTPLFLNPQSLSLLGSNPVSFIPA
SALSLQLTAGTNTITTATTPVNTIVRASKAQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaggagtaatgagccaatatgaaagttcaggaccagactcgataatcaac
ctgtctgtgtccagtaaaagcacaatggagaacggggacatagtcaaaggcgtgctgacc
aatggccgggactctcagaagcagactgtcatgtccctcaccaacgcacagtcacaggct
ctgctgcaacagttgaccttgtctccagcgcagcagcagctgtttctccagcaggctcag
gcccagctccttgcagcagccgttcagcagcactctgccagccaggcccagaacagcagc
accacgggggctgccatctctgcctccgcagccacccccatcaccacccaactaccactg
tcccagcctatacacatcactcctctccagcagcagggcctgcagcagtttgtgttggtc
cagccaggtcattccatggccacccagctacagcctcagttcttcatctcccagactcca
cagggacagcccagtatgtttcagtatcataatcttttgcaagcccaaaatcttctcact
caactacctcagagccaagccaaccacctacagactccaactatcacaattgccccacag
ccggccactcccacgcggaccgtaactgccacccctggccagctcctcatccacagccag
accccgccccctaagggtctgggcacgcccactctggaggatgccaatgatctggaggag
ctggagattttctccaaggccttcaaacagaggaggatcagactgggcttcacacagggt
gacgtggggctggccatggggaagctgtatggtaatgacttcagccagaccaccatctcc
cgctttgaagcactcaacctgagcttcaagaacatgtgtaagctgaaaccgctgctggag
aagtggctcaacgacgcagagaatgtgagctcagagtccagccccagcctcagtcccctg
ggctctggtcacgggtcacccagtctggcatctgacctcaatagccggcgtcgcaagaag
aggaccagcatcgacaccaacatccgtgtggccctggagaagagcttcctccagcaaaac
cagaagccgtcgtcagacgagatctccctgatagcagaccagctgaacatggagaaggag
gtgatccgggtgtggttctgtaaccgccggcagaaggagaagaggatcaaccctcccagc
agctcagctttccagaagtccatcttctcgtcccctactactgccagcctggtgaacact
gtaccccagaccactgtgactgtcaccccctctctgcctgtcaccagcttcagcctcaca
gacaggaccctggtgccagccaccagcaacacagcacccgtcatctccagcacccctaca
gtcccctctatgtccctcacaccctcctcctccgtgacaaccatgtcacagccagccgtt
accatgacgcaggcggggcaaatgctctacagcaacggcgggggtctggctgcaatggca
gctgcagcggcgggaatcagcccgggtctcatgccttcatcgcagttcaacacagggggg
gccttactgaacctaactactgcaggttttggaggagcgctagccaccatccaaggtgtg
ttgagtgctctggcctccagcgggtccttccccatcaccaccctggacgggaacgggaac
ctgctatttgccaacaccagtatgtctggctccgcccccagcatggtgaacacgccactc
ttcctgaacccccagagcctgtccttattgggtagtaaccctgtcagcttcatccctgcc
agtgccctcagcctgcaactcactgctggcaccaacaccatcaccacggcaaccacacca
gtcaacaccatcgtcagagcctctaaggcccaatga
DBGET
integrated database retrieval system
