Oncorhynchus tshawytscha (Chinook salmon): 112246675
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Entry
112246675 CDS
T05605
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112246675 (mindy4)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112246675 (mindy4)
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
112246675 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
112246675
NCBI-ProteinID:
XP_024270927
UniProt:
A0A8C8H8U9
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All DBs
Position
LG06:11754021..11771371
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AA seq
721 aa
AA seq
DB search
MPQVMVVRVEEVAASLVREFLSRKGLKRTIACMDEEHPRTDASINNRSDLRQILHLEGLY
KNNKAQDCPLKSMLEIIVRHHIEGHKEDRPGFNSEVIQTVSTTQKLVTKSPILTPTVYDH
SRAEENTTGFIFNKTDMSRSLSEVVCPPHGTLSSFEVSDTPQRSFWSHSLSSEGQQDRQP
VPSFLDNDSAAKRESFSDKNTVVTTESTHKNKTSRLRRGMMAGPIASSPQESNRKRQTRR
LGGPNLLLANNENHKNISDGPLLTTVQSQRMVKGLTELSTADPMRESQQPRRSTLGKGFD
EDGYGFERVGKDKHKTRRTKSMTNQNVDLHMSEMILDDIDDDEELRELSRVSCHSSSLPP
TTSDSQPMDQHTAIALKELILGSSTSCFSAEWRSQSFTFSDAPDLRYGLVQKKGGPCGVL
ASVQACILQKLLFEGTGSDAGHQRLRPSGAVRTKCLTLATAEILWRAGEGKKATIAITSG
RNHFTPTGHHRSEGVLEKMTCIDVDNLKDLQLLVEQHIQQFESGALGCILLTISAILSRS
IDRVREDMDVPNTTLIGAHGYCTQELVNLLLCGQAVSNVFNNNMELDSGNGNLTLLKGIR
CRSDIGLLSLFEHYNICKVGSNLKTPKFPIWVVCSESHFSVLFGVQELLSDQCVIGEFDL
YYYDGLANQQEEICLTVFVGTSGISAGCQGVDTDLIPPLEHCIRTKWKDAIVNWNATEPI
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagttatggttgtacgagtagaagaagttgctgcatcgcttgtgcgggaattt
ctcagtcggaagggactcaagagaacgattgcctgcatggatgaagagcatccccgtaca
gatgccagcatcaacaatagatccgatctgcgacaaattcttcatttggaaggtctatat
aaaaacaacaaggcccaagactgtcccctgaaatcaatgttggaaatcattgtaagacat
cacattgaaggacataaagaggacaggccaggcttcaacagtgaagtcatccagaccgta
tcaactacacagaagttggtgacaaagtctccaatattgacaccaacagtgtatgaccac
agcagggcagaagagaacactactggatttattttcaacaaaactgacatgtcaaggtca
ctttcagaggttgtctgtccacctcatggtacattgtcatcatttgaagtgtcagatact
ccccagagaagtttctggagccatagcctttcgtcagagggccagcaggaccgacagcct
gtaccctccttcctagacaatgacagcgccgctaaacgggagtccttttcagacaaaaac
acggtcgtcaccacagagagtactcataagaacaaaacaagtcgcctcagacgaggcatg
atggcaggtcccatagctagttccccccaggaatcgaatagaaaacgtcagactcgacgg
ttgggaggccctaatcttctcctggcaaataatgaaaaccacaaaaacatcagcgatggg
cctctgttgactactgtccagtcacagagaatggttaaagggttgacagagctctccact
gctgaccccatgagagaaagccaacagccgcggcgcagcacactgggaaaaggatttgat
gaagatggctatgggtttgagagagtaggaaaagacaagcacaagaccagaagaacaaaa
tcaatgaccaatcaaaatgttgatctgcacatgtcggagatgattttggatgacattgat
gatgatgaggagttgcgtgagctctccagagtgtcctgccactcctccagtttgcctcca
accacttctgatagtcaacccatggaccagcatactgccattgccctgaaagagctcatc
cttggctccagcaccagttgtttcagtgccgagtggaggagtcagagtttcactttctcc
gatgcacctgatctgagatatggacttgttcagaagaagggtggtccttgtggagttctg
gcttcagtccaggcttgtattctgcagaaacttctatttgaggggaccggcagcgacgca
gggcaccagagattaagaccctctggtgctgtgagaacaaagtgcctcactttagccact
gctgagatcctgtggagggctggggaggggaaaaaagccaccatcgccataacatcagga
agaaatcatttcacccctacaggacaccatagatctgaaggagtactagaaaagatgaca
tgtattgatgttgacaatctaaaggaccttcagttgcttgtggaacagcatattcaacag
tttgagtcgggagccttagggtgtatattgctcaccatctctgctattctctccagatct
attgaccgggttagagaggatatggatgtccccaacaccacactcattggagcccatggc
tactgcacacaggagcttgtcaatttattgctgtgtggacaggctgtgtccaatgtcttc
aacaacaatatggagctggattcaggcaatggaaacctgactcttctcaagggaataaga
tgtcgcagtgacattggactgctgtccttatttgaacattataatatatgcaaggttggc
tccaacctgaagactcccaagttccctatctgggtggtgtgcagtgagagccatttcagc
gtgctctttggtgtgcaggagctgctgagcgaccagtgtgtgatcggggagtttgacctg
tactactacgacggcctagccaatcagcaggaggaaatctgcctaactgtctttgtaggt
acctcaggaatatctgctggctgccaaggtgtggacactgatctcattcctcctcttgaa
cactgtatacggaccaaatggaaagatgccattgtcaattggaatgccaccgagcccata
ctttga
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