Oncorhynchus tshawytscha (Chinook salmon): 112246857
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Entry
112246857 CDS
T05605
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112246857
Membrane trafficking [BR:
otw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112246857
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_5
Ig_2
ig
LRR_9
LRR_EndoS
V-set
LRR_Zer-1
LRRNT
LRRCT
Big_2
Receptor_2B4
Big_6
Motif
Other DBs
NCBI-GeneID:
112246857
NCBI-ProteinID:
XP_024271197
UniProt:
A0A8C8MAP1
LinkDB
All DBs
Position
LG08:25243040..25275141
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AA seq
611 aa
AA seq
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MRRSALYHCHPLLGGALLLLLASCAMGCPARCDCSAQTKSVSCHRKRLPTIPEGIPIETR
LLDLSKNKLRSITPDNFSSFLQLEDLDLSDNLIGVVEPGSFKFQLSLRSLNFHSNLLQLV
PAGVLSGLANLTSLDLSHNKLVVLLDHGFQDLRRLMSLEVGDNELVFISQRAFTGLLGLQ
SLTLERCNLTVVPTDALGHLHSLVELRLRHLGISTLKPYSFKRLPRLRHLEIDYWPWLEV
LPALSLHSLNLTTLSVTNTNLSSFPGHALRNLPYLTHLNLSFCHIQHIQQGVLDQLPRLQ
ELHLRGAQLVYIEPLAFLGLPALHMLDVSHNQLDSVERAVFKSPDSLQTLLMGGNPLVCD
CRLLWLLSGRKPPFLQLPDPQPECSAPERLRGKPLLDLKEPLVTRYVICTKPRIGPNTTQ
LLLADEGKPVRLNCIADGAPRPSMAWVTPHRQYVTVKSTGRVTVHTDGTLEIKAAELHDS
GVYLCVASNAAGNASLSASLAVKSLGISDTSLYANKIGLLADSNGTWANGTVLYNMTNPI
DLKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDMEYVPRKSNGTAAEATET
SGPRRVNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctccgccctgtaccactgccaccctcttctgggtggggctctgctgctactg
ctggctagctgcgccatgggctgccctgcccgctgcgattgctccgcccagactaagtcg
gtcagctgccatcgcaagcgcctgcccaccatccctgagggcatccccatcgagacccgg
cttctggacctgagcaagaacaagctgcggagcatcaccccagacaacttctcctccttc
ctacaactggaggatctggacctcagcgataacctgattggcgtggtcgaaccgggctcc
ttcaaatttcagctctccctgcgctcgctgaacttccacagcaacctcctccagctggtc
cctgccggcgtgctctccggcctggccaacctcacaagtctggacctcagccacaacaag
ctggtggtgctgctggaccatggcttccaggaccttcggaggctgatgtcccttgaggta
ggcgacaatgagctggtgttcatctcccagagggccttcacaggcctgctgggcctacag
agcctcaccctggagcgctgcaacctgactgtggtgcccaccgatgccctgggtcacctg
cacagcctggtggagctccgcctgcgccacttgggcatcagcacactgaagccctattcc
ttcaagagacttccccgtcttcgccacctggagatcgattactggccctggttggaagtc
ttacccgctctgtcactacacagcctcaacctcaccacgctctctgtcaccaataccaac
ttgtcttccttccccggccatgctctacgcaacctgccctacctcacgcacctcaacctg
tccttctgccacatccagcacatccagcaaggggtgctagaccagcttccgcgactgcag
gagttgcacctgcgaggagctcaactggtttacattgaacccctggccttcctgggcctc
ccagcactacatatgttggacgtgtcccacaaccagctggactcagtggagcgagctgtg
ttcaagtcccctgacagcctgcagacgctgctcatgggggggaacccactggtgtgcgac
tgccggctcctatggctgctgagtggccggaagccaccctttctgcagctccctgacccc
cagcccgagtgcagtgcccctgagcgcctccgtgggaaacccctgctggacctcaaggag
ccactggtgacacggtacgtgatctgcaccaagccccggattgggcccaacaccacccag
ctgctgctggcagatgaggggaagcctgttcggctcaactgcattgcagacggggctcct
cggccctccatggcctgggtgacgccacacagacagtatgtcacagtgaaaagcaccggt
agagtgacggtccataccgacggcaccctggagatcaaggctgcagagctgcacgatagt
ggcgtgtacctgtgtgtggccagcaatgcggcgggcaacgccagcctgtcggcctcgctg
gcggtgaagagcctgggcatcagcgacacatcgctctacgccaacaagattggactcctg
gcagactccaacgggacctgggccaacgggaccgtcctgtacaatatgacaaaccccata
gacctgaagaccatcatcatctccacagcaatgggctgcctgtccttcctgggcgtggtc
attttctgtttcctgctcctgtttgcatggagtcgtgggaagggaaggcacaagagcaac
tttgacatggagtacgttccccgcaaatcgaacgggacagcagctgaggcaactgagaca
agcgggcccagacgagtcaacatgaaaatgatttaa
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