Oncorhynchus tshawytscha (Chinook salmon): 112247729
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Entry
112247729 CDS
T05605
Name
(RefSeq) src substrate cortactin isoform X1
KO
K06106
cortactin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112247729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112247729
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112247729
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112247729
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112247729
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112247729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HS1_rep
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
112247729
NCBI-ProteinID:
XP_024272319
LinkDB
All DBs
Position
LG15:4096880..4103400
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AA seq
540 aa
AA seq
DB search
MWKSVVGHNVSLKVAEGDDWETDPDFENDVSEQEQRWGAKTIEGSGRKEHISVSELRQKV
SQEHEVGKQKERAEAPKASYGYGGKFGVEKDRMDKGAVGHGYVAQVEQHSSQTDAKRGFG
GKFGVQKDRVDKSAMGFEYKGEVEQHTSQKDYSKGFGGKYGVEKEKVDKAALGYDYKGET
EKHQSQKDYSKGFGGKYGVEKEKVDKAALGYDYKGETEKHQSQKDYSKGFGGKFGVEKEK
VDKAALGYDYKGETEKHESQKDYAKGFGGRHGVQTDRMDKSAVAFTDMESPTSAYEKTIP
LEASSAGAGNLKARFENLARSSDEENRKRAEEERARRQAREKREQEEARRRQQEQNSREE
EAEQHQPPPVEEQRPPPVEEQRPPPVPETNRKPQPPQLPTARAVPQIPRDEPELVEEEEE
PDYDQPPCLPPRSSDLLEAEPPQEQTPSEEPEQEDEGEYEDISPIPFFPEPVPALDNDYE
DLTCGQTAVAIYDYQGEADDEISFNPDDVITNIEMVDEGWWKGHCHGRIGLFPATFVKMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagtcagtggtgggacacaacgtgagcttaaaggttgcggagggggacgactgg
gagaccgaccctgactttgagaatgatgtgtcagaacaggaacagagatggggggccaag
accattgaggggtctggtcgaaaagaacacatcagtgtatcagagctgagacagaaggtg
tcccaggagcatgaggtggggaagcagaaggagcgagcggaggctcccaaggcctcttat
ggttacggggggaagttcggagtggagaaagaccgcatggacaagggggcagtggggcat
ggctacgtggcgcaggtggagcagcactcatcccagaccgatgcaaagagaggattcggg
gggaaatttggagtgcagaaagaccgtgtggataagtctgccatgggttttgaatacaag
ggtgaggtggagcagcatacatctcagaaagactattcaaagggttttggagggaagtat
ggggtggagaaggagaaagtggacaaggctgccttgggatacgactacaagggagagacc
gagaaacaccagtctcagaaagactattcaaagggttttggagggaagtatggggtggag
aaggagaaagtggacaaggctgccttgggatacgactacaagggagagacagagaagcac
cagtctcagaaagactattccaagggttttggggggaagttcggggtggagaaggagaaa
gtggacaaggctgctttaggttacgactacaagggagagaccgagaagcatgagtcacag
aaagactatgccaagggctttgggggacgccatggcgtccagacagaccgcatggataaa
agtgcagtggccttcacagacatggaatcccctacctctgcctatgagaagacaatacca
ttggaggcatcaagtgcaggggcaggcaacctgaaggctcgctttgagaacttggctcgg
tcatcagacgaggagaacagaaagcgagcggaggaggagagagccaggagacaggctaga
gagaagagagagcaggaggaggcacgacgcagacaacaggaacagaacagcagggaggag
gaagcagagcagcatcagcctccacctgttgaagagcagagacctccacctgttgaagag
cagagacctccacctgttccagagaccaacaggaagccccaaccaccacagctgcccact
gccagggcagtgcctcagataccaagagatgaacctgagctcgtggaggaagaggaggag
ccagactatgaccagcccccatgcctgcccccacggtcaagtgacctgctggaggcggag
ccacctcaggagcagaccccatcagaagaaccagagcaggaggatgagggagagtatgag
gatatctcaccaatacctttcttcccagaacctgttccagctttggataatgactatgag
gacctgacatgcggtcagacagcagtggctatttatgactaccagggagaggcagatgat
gagatctccttcaacccggatgatgtcatcaccaacatagagatggtggacgaaggctgg
tggaagggacactgtcacggacgcattggacttttccctgctacattcgtgaaaatgatg
tag
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integrated database retrieval system
