Oncorhynchus tshawytscha (Chinook salmon): 112248510
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Entry
112248510 CDS
T05605
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112248510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112248510
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
AP-1 complex
112248510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
PDS5
Cnd3
RTP1_C1
Arm
HEAT_EZ
Maestro_HEAT
XMAP215_CLASP_TOG
Arm_2
API5
FANCI_S3
Transposase_22
Alpha_adaptin_C
Motif
Other DBs
NCBI-GeneID:
112248510
NCBI-ProteinID:
XP_024273365
LinkDB
All DBs
Position
LG04:complement(31132615..31182691)
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AA seq
972 aa
AA seq
DB search
MEWANQLCENRQFGSKMTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVG
KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRA
LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDT
LKDLISDSNPMVVANAVAALSEIAESHPNSNLLDLNPQSINKLLTALNECTEWGQIFILD
CLANYTPRDDRESQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYGTLLKKL
APPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIR
LASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVN
YVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADE
LLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGY
IYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLEELICHIGTLASVYHKPPSAFVEG
SRGVMHKRLPARTGSGEGTECPDVGNAAGGSAPEAAPSIIPSQGDLLGDLLNLDLAPPTT
TGPTPSTSGMQMGGMDLLGGGLDSLMDESEPLGGDIGGSPAMGAGFGAAPTVMPASLNAP
VGGGLGDLFDLGGGVGMPMGAYIPPKTVWLPAMKAKGLEISGTFARRAGVIQMELVLTNK
AMSVMTDFAIQFNRNSFGLAPAGPLQVLTPLGPNQTIEVSLPLSTVGPVMKMDPLNNLQV
AVKNNIDVFYFSCQYPISMLFVEDGKMERQVFLATWKDIPNDNESQFQIQDCHLNSEAAS
NKLQGSNIFTIAKRTVEGQDMLYMSIKLSNGIWVLAELKVQAGNPNYTISLKCRAPEVSQ
CVFQCYEAVLKN
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggctaatcaattatgcgagaaccgacaatttggatccaagatgacggactcc
aagtatttcaccactacaaagaaaggagagatctttgagctgaaagccgagctgaacagc
gataagaaggagaagaagaaggaggctgtgaagaaggtcattgcctccatgaccgttggg
aaagatgtcagtgccctgtttccagatgtggtgaactgcatgcagactgacaacctggag
ctgaagaagctagtctacctgtacctgatgaactatgccaagagccagcccgacatggcc
atcatggctgtcaacaccttcgtcaaggactgtgaggaccctaaccccctgatccgggcc
ctggctgtgcgtactatgggctgcatccgcgtggacaagatcactgagtacctgtgtgag
cctctgaggaaatgtctgaaggacgaggacccctacgtgaggaagactgcagctgtgtgt
gtggccaagctccatgacatcaacgcccagctggtggaggaccagggcttcctagacacc
ctcaaggacctcatctctgactccaaccctatggtggttgcaaatgctgtggcagccctg
tctgagattgcagagtcccaccccaacagtaacctgctggacctgaacccccagtccatc
aacaagctgttgacggccctcaacgagtgcaccgagtggggtcagatcttcattctggac
tgcctggccaactacacccctcgcgatgaccgcgagtcccagagtatctgtgagcgggtg
accccccgtctgtcccatgccaactctgcggtggtgctgtcggcggtcaaggtgctgatg
aagttcatggagatgcttcctaaggacctggactactatggcaccctgctgaagaagctg
gccccgcccctggtcaccctgctgtctgcagagcccgagctgcagtacgtggccctgagg
aacatcaacctcatcgtacagaaacgcccagagattctgaagcatgagatgaaggtgttc
tttgtgaagtacaacgaccccatctacgtcaagctggagaaactggacatcatgatccgc
ctggcatctcaagctaacatcgcccaggtgctggcagagctgaaggagtatgccactgag
gtggatgtggactttgtgcggaaggcagtccgagccatcggccgctgtgccatcaaagtg
gagcaatcagcggagcgctgtgtgagcaccctgctggacctcatccagaccaaggtcaac
tatgtggtgcaggaggccatcgtggtcatcaaggacatcttccgcaagtacccaaacaag
tatgagagtgtgatcgccacgctgtgtgagaacctggactccctggatgagccggaggcg
cgggcagccatgatctggatcgtaggagagtatgctgagcggatcgacaacgctgacgaa
ctgctggagagctttctggagggcttccacgacgagagcacccaggtgcaactgcagctg
ctgacagccatagtgaagctgttcctgaagaaacccactgagactcaggagctggtgcag
caggtgctgagcctggccacacaggactctgacaacccggacctgcgagaccgtggctac
atctactggcgtctgctctccactgaccctgtggctgccaaggaggtggtgctggccgag
aagcctctgatctcagaggaaaccgacttgattgagcccaccctgctggaggagctcatc
tgccacatcggcacgctggcctccgtctaccacaagcctcccagcgccttcgtggagggc
agccgcggtgtgatgcacaaaaggctccccgcacgcactggatcaggagagggtacggaa
tgcccagatgtgggcaatgctgctgggggctctgcccctgaagctgccccctctatcatc
ccctcccagggagacctcctgggggaccttctcaacctggacctggcaccccccaccacc
actggtcccaccccctccacctccggcatgcagatggggggcatggatctccttggtgga
ggtctggacagcctgatggatgagtctgaaccgcttggaggagatattggtgggagtcct
gcgatgggagctggttttggcgcagctcccactgtgatgccagcctctctaaacgctcct
gtgggaggcggccttggagacctctttgacctcggagggggggttggcatgccgatggga
gcatacattccacccaagacagtgtggctcccagccatgaaggctaaaggtctggagatc
tctgggacctttgcccggcgtgctggagtcatccagatggagctggtcctcaccaacaag
gccatgagcgtcatgactgacttcgccatccaattcaacaggaacagttttggactggcc
cctgccggcccactccaggtcctcacccctcttggcccaaaccagaccattgaagtcagc
ctccccctcagcactgttgggccagtcatgaagatggaccctctcaacaacctgcaggtg
gctgtgaagaacaacattgacgtcttctacttcagctgccaataccccatcagcatgctg
tttgtggaagatggaaagatggagcgacaggtgttcctggccacatggaaagacattcct
aacgacaacgagtctcagttccagatccaagactgtcatctcaactcagaggcagccagc
aacaagctgcagggcagtaacatcttcaccatagccaagcgcacggtggagggccaggat
atgctttacatgtccatcaaactgtccaatggcatctgggtgctggctgagctgaaggtg
caggctggaaaccccaactacacgatctctctgaagtgcagagccccagaggtgtcccag
tgtgtgttccagtgctacgaggcagtgctgaagaactga
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