KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112248882
Entry
112248882         CDS       T05605                                 
Name
(RefSeq) interleukin-1 beta
  KO
K04519  interleukin 1 beta
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010  MAPK signaling pathway
otw04060  Cytokine-cytokine receptor interaction
otw04217  Necroptosis
otw04620  Toll-like receptor signaling pathway
otw04621  NOD-like receptor signaling pathway
otw04623  Cytosolic DNA-sensing pathway
otw04625  C-type lectin receptor signaling pathway
otw05132  Salmonella infection
otw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    112248882
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    112248882
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    112248882
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    112248882
   04621 NOD-like receptor signaling pathway
    112248882
   04623 Cytosolic DNA-sensing pathway
    112248882
   04625 C-type lectin receptor signaling pathway
    112248882
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112248882
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112248882
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:otw04052]
    112248882
   00536 Glycosaminoglycan binding proteins [BR:otw00536]
    112248882
Cytokines and neuropeptides [BR:otw04052]
 Cytokines
  Interleukins
   112248882
Glycosaminoglycan binding proteins [BR:otw00536]
 Heparan sulfate / Heparin
  Cytokines
   112248882
SSDB
Motif
Pfam: IL1 IL1_propep
Other DBs
NCBI-GeneID: 112248882
NCBI-ProteinID: XP_024274044
LinkDB
Position
LG04:complement(46085468..46089023)
AA seq 260 aa
MDFESNYSLIKNTSESTAWSSKLPQGLDLEVSHHPITMRHIANLIIAMERLKGGEGVTMG
TEFKDKDLLNFLLESAVEEHIVLELESAPSTRRRAAGFSSTSQYECSVTDSENKCWVLMN
EAMELHAMMLQGGSSYHKVHLNLSSYVTPVPIETEARPVALGIKGSNLYLSCSKSGGRPT
LHLEEVADKEQLKSISQQSDMVRFLFYRRNTGVDISTLESARFRNWFISTDMQQDYTKPV
DMCQKAAPNRLTTFTIQRHN
NT seq 783 nt   +upstreamnt  +downstreamnt
atggattttgagtcaaactacagtttaataaagaacacctctgaaagcacagcatggagc
tccaagctgcctcagggtctggatctggaggtatcccatcaccccatcaccatgcgccac
attgccaacctcatcatcgccatggagaggttaaagggtggcgagggggttaccatggga
accgagttcaaggacaaggacctgctcaacttcttgctggagagtgctgtggaagaacat
atagtgttggagttggagtcggcgccctcaacaaggaggagggcagcagggttcagcagt
acatcacagtatgagtgtagcgtcactgactctgagaacaagtgctgggtcctgatgaat
gaggctatggagctgcacgccatgatgctccagggaggcagcagctaccacaaagtgcat
ttgaacctgtcttcgtacgtcacgcccgtccccattgagactgaagccagacctgtagcc
ctaggcataaagggatccaacctctacctgtcctgctccaaatcgggaggcaggcccacc
ctgcacctagaggaggttgcggacaaggagcagctgaagtccatcagccagcagagcgac
atggtgcgtttccttttctacagacggaacaccggggttgacatcagtaccctggagtct
gccaggttcaggaactggttcatcagcacggacatgcagcaggactacaccaaaccggtg
gacatgtgtcagaaggcagcccccaaccgccttaccaccttcaccatccagcgccacaac
taa

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