Oncorhynchus tshawytscha (Chinook salmon): 112251311
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Entry
112251311 CDS
T05605
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112251311
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
112251311
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
112251311
NCBI-ProteinID:
XP_024278004
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Position
LG05:complement(71864578..71876201)
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AA seq
468 aa
AA seq
DB search
MNPDSDYGMSTVSCGNGKLRSWLIEQVDTGKYAGLVWENDDKSIFRIPWKHAGKQDYNRD
EDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVEKSQLDISDPYKVY
RIIPEGAKRHFLLSGSKQEDGGSPQTPPSYPMHPSYPALQTQMSGYMSSAERGWMRDYLP
EQTSLPELPYAQCSYPSRSLPWAQGPSMDNGYQITGSFYTYPTDGQPSPFTLDTSMRSAE
ALSDMRLHVSVFYRDSLWREVTTSSPEGCRITPCSPDDKLYSPTGGPDLVPLPLDSLPAL
GRGEECPPSPPGGTLERGVLLWMAPDGLYARRLCQERVFWEGGLSPYGDKPNKLEREHTC
KLLHTQDYFAELQGYALHGRPPPRLQVLLSFGDECLDPQRQRRTLTVQVEPMFARQLLYY
TQHQQTSGHYYRSYDLSLPGVTEHSMTPALTEDYQRVITHHHSNTLQD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggattcggactacggcatgtctacagtgagctgtggaaacgggaagctccgc
tcgtggctgatcgagcaggttgacaccgggaagtacgcaggcctcgtgtgggagaacgac
gacaagagcatcttcaggataccgtggaagcacgcaggcaagcaggactacaaccgggac
gaggatgccgctctcttcaaggcttgggcgctgtttaagggcaagtttcgcgagggcatc
gacaaacctgacccacctacgtggaagacgcgcctgcggtgcgcactcaacaaaagtaac
gatttcgaagagctcgtggaaaagagtcaactggacatctcagacccctacaaagtctac
cggattatacccgagggcgccaagagacatttcttgctatcaggatccaaacaggaggat
ggtggcagcccgcagactcccccgagctatcccatgcacccctcctaccccgccctacag
actcagatgtctgggtacatgtccagtgcagagcgaggctggatgagggactatcttcca
gagcagacctcgctccctgagctgccctatgcccagtgttcctacccctcacgcagccta
ccctgggcccagggccccagcatggacaacgggtaccagatcacagggtccttctacacc
taccctactgatggccagccctcccccttcacactggacaccagcatgagatcagccgag
gcactctcagatatgcggttacatgtgtcagtgttctaccgggactcattgtggagggag
gtgaccacctctagtcctgaaggctgtcgcatcactccctgctccccagacgacaagctc
tattcccccactggaggtccagacctggtgcccctacccctggacagcctcccagccctg
gggaggggggaggagtgcccccccagcccccctggtggtaccctggagaggggcgtgctg
ctatggatggccccagatggcctctacgctcggcggctgtgccaggagagagtgttctgg
gagggagggttatcgccctacggagataaacccaacaagctggagagagaacacacctgt
aaactactgcatacacaggactactttgcagagctgcagggctatgccctccacggccgg
ccccctccacgtctccaggtgctgctgagttttggagacgagtgtctggacccacagaga
cagaggaggaccctcactgtacaggtggagcccatgtttgccaggcaactcctatactac
acccagcaccagcagaccagcggacactactaccgcagctacgacctctccctcccaggg
gtcacggaacacagcatgacacctgctttaaccgaggactaccagagggtcatcacgcat
caccatagcaacaccctgcaggactga
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