Oncorhynchus tshawytscha (Chinook salmon): 112252572
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Entry
112252572 CDS
T05605
Symbol
nup205
Name
(RefSeq) nuclear pore complex protein Nup205
KO
K14310
nuclear pore complex protein Nup205
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112252572 (nup205)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112252572 (nup205)
03036 Chromosome and associated proteins [BR:
otw03036
]
112252572 (nup205)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112252572 (nup205)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112252572 (nup205)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
112252572
NCBI-ProteinID:
XP_024279660
LinkDB
All DBs
Position
LG06:complement(43559948..43579657)
Genome browser
AA seq
1984 aa
AA seq
DB search
MAAQMAVNSGASLWGPLKELWDTVEGAVWRRQPESVHLLDLQLKKHKPNFLSLYKNPPKS
AEQREKVRKASTEGIAIQGQQGSRLLPEQLLTEAFILSDLFDIGELAALELLLAGENQQP
HFPGLSRGLVAVLLYWDGKLCVANSLRSLIQSRHGKTFTLELSGELVALTTRFTDELMSQ
GLTRRLLTLVSEINVTREFERLQKERGLGNEKHRKEVSDLIKECRQALADCLFAWTCQSP
LGKDDTLALVAHLETVTVEADGSLDSVNLALVMALLYCLDVSFLEQGTEDREDLLQALPL
LTEKQYVSAVHSRLVDGRPWKLPGLQAVCRLAWALALHALSQLPQGSALAEFTEADEALA
DQALLGGVFLFMTEGMLGCEGFTHDEFYTRRLHSLITDFLALMPMKVKQLRNRADEDARL
VHMSLQMGSEPPSSLRKDLDHLMILIGEFYSKDLFGLELALEFWCHTESLQHTSLQGSYL
GMAMQRPPHKQVVLSKFVRQMGDLLPPTLYIPYLRMLKGLANGPQCAHYCFSLLKTNGAP
HGDNMQVTGSPVSWEHFFHSLMLYHENLRRDLPNADATHYRLPPIRGITQRELDGLTSFL
QLLCTIITWSENARLALCEHPQWTPAVVMLGLLQCSVQPVLKGELLLCLAAFGKSPEIAA
SLWQSLEYTQILQTVRAPGQKQAAGIEVELNEIESSCEEYPLTRAFCQLISTLVESALPV
NLGAGLRAPGFQPYLTFLRDAVFLPFPTRAYRRAAEKWEVADAVLEVFHKLLRDYEPQPS
DFVQETVELQGEQVLAHKPPGHSLMFHLLNDSPTLTLCLSLLEEGVRQLDTYSLFPGKKQ
LESAVLHCLCLLDLALQKEVVFMDLLRESQASLIVSPLEQLLQGVSAQSRRADHIVNIAR
YLYHSSSNPEAAFQSAKILQRIARYPNIQNRLVGDFTHDQTVSDKLMAGFVECLDNEGAE
EGLEKGDDSEPAKKEARIRHETQIHILNLLITSLELKTPNLALYLLGYEVKKPINSTNLQ
DAGVLGCPRSCLHAILSLLQRGSERRSGPVLTSQAPHLAELCYQVIYQLCVCSDTSGPTM
RYLRTSQDFLFTHLQHLPFILPGDEISALSQMSWLMKTAAIELRVTSLNRQRSHTQRLLN
LLLDDQPRTQHAADGETGMEESRSVSGFLHFDTVSKVRRKLLSVLDAINFSQDVPELLQL
DFFERTQIEQVIANCEHVNEHGHTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEVNS
ILQQVVERNRVRRSLSAKRHALQSWRGLVETLLTACPADLIPADDRQIIIRDLLLDLHDK
VLSEDSAGELMPIVAGAVFTLTAHLSQSVLSEQQQGAGLEGGSSSGFASIANSALHLILR
KLLDFILCTGGGFQRLRAHLYGALLYYLQIAQKPEEPDTLQQAGKSMWERLTAPEDGFSK
LQRENLAIIESYGTALMEVVCRDACDGHEIGRMLALAVLDRILSIDRQSQWLLYVCNSGY
LRVLVESLRQDDTALQTLLSPQPPLLKPLYIYESKMALLTRVAKTGQGAVELLRCGLVAQ
LVECQVFDMVPDSDSHRVFGQRDPSGFIPSPLDRYRQILLPALRLFQVILTSTTTHHQQG
ATQVLQWLIVHADTIQGLLRCQELSMGALQELSLLTGIISKTALPGALEGQDVNSAALPE
FQGHISRFQRQCLSLLGRLAGSERERLLKQAEIAAPGDPAERREEMEVAMQQVCANIMEY
CQTLLLQSSAQAQFSICLFSPSVNEPASRDGHTDLALPSALYSRVPSLGLVLFLLKNSAA
DFFRFHQSHRQALGKLQSLEQLPPEELKELCAALVSGTGGVEKISSVQRSLLAKRRLVQL
INNRAKLLALCSYVIETCLFVMWRHLEYYLLYCTPTDPKDSLMPGASAYRSRLTDDSFGR
ALGLSRVSQQDLEQLQSDMGAGFGEALQRKLLEVEGLYSQVRSRYTFIQALVRRIRGLLR
QPKS
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagatggcggtaaattcaggagccagtctgtgggggccgctgaaggagcta
tgggacacagtggagggtgcagtgtggaggaggcaaccagagagcgtccacctcctagac
cttcaactcaagaaacacaagcccaatttcctctcactctacaagaacccgccaaagagt
gcagagcagagggagaaggtgcggaaagccagcacagagggcattgccatccagggccag
caggggtcacgtctcctccccgagcagctgcttacagaggccttcatcttgagtgacctc
tttgacattggagagctggcagccctggagctgctgttggcaggtgagaaccagcagccc
cactttccaggtctgagtcgggggctggttgcagtgctgctgtactgggatggaaagctc
tgcgtggccaactccttgcgctcgctcattcagtcccgccatggcaagaccttcaccttg
gaattaagtggggagctggtggccctcaccacacgcttcacagatgagctgatgagccag
ggcctgacgagacgcctactgacgctggtgtcagagatcaatgtaacgcgggagtttgag
cgcctgcagaaagagcgaggcctgggcaacgaaaaacacaggaaagaggtatcggacctc
atcaaagagtgccgacaggcactggcagattgcctgtttgcatggacctgccaatcacct
ctaggtaaggatgacaccctggcccttgttgcccaccttgagacggtgacagtggaagct
gatggctcattggacagcgtgaatctggctctcgtcatggcactgctgtactgtctggac
gtcagcttcctggagcaaggaacagaagatcgagaagacctcctccaggccctgcccctg
ctgacagagaagcagtacgtgtctgcagtacacagtcgtctggtggatgggaggccctgg
aagctgcctgggctgcaggctgtgtgtcggctggcctgggccctggccctgcatgccctc
tcccagctgccccagggctcagccctggcagagtttacagaggcagatgaggcactggcc
gaccaggccctgctaggaggtgtcttcctcttcatgacagagggcatgctgggatgtgag
ggcttcactcatgatgaattctacacccgccgcctccattccctcatcactgacttcctg
gcactcatgcccatgaaggtgaagcagctgcgtaaccgtgctgacgaggacgccagactg
gtccacatgtctctgcagatgggcagtgagcctccgtcctccctgaggaaagacctggac
cacctcatgatcctgatcggagagttctatagcaaggacctgtttgggctggagctggct
ctggagttctggtgccacactgagtccctccagcacacctccctccagggctcctacctg
ggcatggccatgcagaggcccccacacaaacaggtggtgctgtctaaatttgtgcgtcag
atgggggacctgctgccccccaccctgtacatcccttacctgcgcatgctgaagggcctg
gccaacggcccccagtgtgcccactactgcttcagcctgctaaagaccaacggggcccca
cacggggataacatgcaggtgaccggcagccctgtgtcctgggagcacttcttccactcc
ctcatgctgtaccacgagaacctgcgccgagacctgcctaatgctgatgccacacactat
cgcctcccgccaataaggggcatcacacagagggagctggacggcctgacctctttcctg
cagctgctctgcaccatcattacctggagtgagaatgcccgcctggccttgtgtgagcac
ccccagtggaccccggctgtggtgatgctggggctgctgcagtgcagtgtgcagccggtc
ctcaagggggagctcctgctctgcctggctgcctttggcaagtctccggagatagctgcc
tccctctggcagtcactggaatacactcagattcttcagacagtgcgggcccctggacag
aaacaagctgctgggattgaggtggagctgaatgagattgagtcgagctgtgaggagtat
cctctgaccagagccttctgtcagctcatcagcacattggtcgagagcgccctgcccgtc
aacctgggggcggggctccgtgcgccaggattccagccctacctgaccttcctgcgtgac
gccgttttccttcccttccccaccagagcctatcgccgtgctgctgagaagtgggaggta
gcggatgctgttctggaggtgttccacaagctgctgagggactacgagccccagccctca
gactttgtccaggaaacagtggagctccagggggagcaggtgctggcccacaagcccccc
ggccacagcctcatgttccacctgctcaacgactcgcccaccctcaccctctgcctcagc
ctgctggaggagggcgtgcgtcagctagacacctactccctcttccctggtaaaaagcag
ctggagtctgcggtgttgcactgcctgtgtcttctggacctggccctgcagaaagaggtg
gtgttcatggacctgctgagggagagccaggcctccctcatcgtctctcccctggagcag
ctcctgcagggcgtcagcgcccagagccgccgggctgaccacatcgtcaacatcgccagg
tacttgtaccacagcagttccaacccggaggcggccttccagagtgctaagatcctgcag
aggatcgcccgctaccccaacatccagaacagactggtgggagacttcacacacgaccag
actgtgagtgacaagctgatggctggcttcgtggagtgtctggacaacgagggggctgag
gagggactagagaaaggagacgactctgagccagcgaagaaggaagcgaggatccgccac
gagacccagatccacatcctgaacctgctgatcacctccctggaactgaagacccccaac
ctggctctctacctgctgggctacgaggtcaagaaacccatcaactccaccaacctgcag
gacgcaggtgtgctggggtgcccacggagctgtctgcatgccatcctgagtctgctgcag
agaggcagtgagagacgctcgggacctgtgctcaccagccaggccccacacctggctgag
ctctgttaccaggtgatctaccagctgtgtgtgtgctcggacacatcaggacccaccatg
cgctacctgaggaccagccaggacttcctgttcacccacttgcagcacctgcccttcatc
ctaccaggtgatgagatctccgccctgtcccagatgtcctggctcatgaagacagcggcc
atcgaactccgagtaacatcactcaaccgccagcgctcacacacccagcgcctcctcaac
ctgctgctggatgaccagcctcgcactcagcacgcagcggatggggagaccggcatggag
gagagcagatctgtcagtggattcctgcactttgacaccgtctccaaagtgcgtaggaag
ctcctcagcgtgctggatgccattaacttcagccaggatgtgccagagctgctgcagctg
gacttttttgagcgcactcagatcgagcaggtcatcgccaactgcgagcacgtcaacgag
cacggacacaccgtctgcaacgtcaagttactccatcgagtcctggtagcggaggtcaac
gcccttcaggggatggcagccattggacagaggccactgttgatggaggaggtgaactcc
atcctgcagcaggtggtggagaggaatcgtgtgcgtcggagcctgagtgccaagcgccat
gcgctgcagtcatggagaggtctggtggagaccctgctcaccgcctgccctgcagacctc
atccctgcagacgacagacagatcataatcagggacctgctgctggacctgcacgacaag
gtgttgtcagaagactccgcaggagagctaatgcccatagtagccggggctgtgttcacc
ctcaccgcccacctcagccaatcggtgctgtcggagcagcagcagggggcagggctggag
ggaggctcatcgtcgggcttcgcctccatcgctaactctgctctgcacctgatcctgagg
aagctgcttgacttcatcctctgtacgggtggtggattccagcgtctgcgtgcacacctg
tacggcgctctgctctactatctgcagatcgcccagaaacctgaggagccagatacactg
cagcaagcggggaagtctatgtgggagcgtctgactgctcctgaggatggtttctccaag
ctgcagagggagaacctggccataatcgagagctacggcacagccctcatggaggtggtg
tgcagggacgcctgtgacggccatgagatcggcaggatgcttgccctggccgtgctggac
cggatcctgtccatagaccgtcagagccagtggctgctgtacgtgtgtaacagtggttac
ctgcgtgtgttggtagagagcctgaggcaagacgatacagccctgcagaccctgctcagc
ccccagcccccgctgctcaaacctctctacatctacgagagcaagatggccctgttgaca
cgagtggctaagacaggccagggggccgtggagctgctgcgctgtggtctggtggctcag
ctggtggagtgtcaggtgtttgacatggtgcctgacagtgactcacacagggtgtttggt
cagagggatccttcagggttcatccccagccctctggaccgctacagacagatcctactg
cctgctctcaggttgttccaggtcatcctcacgtccaccaccacacaccaccagcagggg
gcaacacaggtcctccagtggctgatcgtccatgccgacaccatccaagggctgctgcgc
tgtcaggagctcagtatgggagcgctgcaggaactctccctgctcacaggcatcatcagc
aagactgccctgccaggagctcttgagggacaggacgtgaacagtgcagctctgccggag
ttccagggtcacattagcagatttcagcgtcagtgtctgtctctgctgggccgtctggcg
ggtagcgagagggagcgactcctgaagcaggcagagattgcagccccgggggaccctgcc
gagcgacgggaggagatggaggtggccatgcaacaggtgtgtgctaacatcatggagtac
tgccagaccctgctactgcagagctcagcccaggcccagttcagcatctgtctcttcagc
ccctcggtcaacgaaccagccagccgagacggccacacagacctggccctgccatcagcc
ctgtactctcgtgtgcccagcctgggtctggttctcttcctgctgaagaacagcgctgcg
gacttcttccgcttccaccagagccatagacaagccctgggcaagctgcagagcctggag
cagctgcccccagaagagctcaaggagctgtgcgcggccctggtgtctggtactggtgga
gtagagaagatctcctctgttcagcggagcctcttggccaagagacgcctggtccagctc
atcaacaacagagcaaagctgctggccctctgctcctatgtgattgagacctgcctattt
gtgatgtggcgccacctggagtactacctgttgtactgcacccccactgaccccaaagac
tccctaatgcctggcgccagcgcctacagatcacgcttgactgacgactcgtttggacgt
gccctgggcttgtcccgagtcagccagcaagacctggaacagctgcagagtgacatgggg
gcaggcttcggagaggctctacagaggaagctgctggaggtggaggggctatacagccag
gtccgctcccgatacaccttcatccaggccctggtacgcaggatccgaggcctgctccgc
cagcccaagagctga
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integrated database retrieval system
