Oncorhynchus tshawytscha (Chinook salmon): 112253313
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Entry
112253313 CDS
T05605
Name
(RefSeq) protein quaking-B isoform X1
KO
K14945
protein quaking
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112253313
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112253313
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Gene cluster
GFIT
Motif
Pfam:
STAR_dimer
KH_1
KRR1-like_KH2
Motif
Other DBs
NCBI-GeneID:
112253313
NCBI-ProteinID:
XP_042179142
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All DBs
Position
LG01:55153519..55265386
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AA seq
342 aa
AA seq
DB search
MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
LNGSTEKRSSELPDAVGPMVQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK
IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVNKLLV
PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAANAQAPRIIAGPAPMPQNALR
TSTPAGPTLMPLIRQIQTCMPNGSPHPGVMTQGPESGLIYASPYDYPYTLAPATSILEYP
IDSSGVLGKHACPCDCPAAPHQHHHPHGQWNPAPTLILRHSS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggttggggaaatggaaacgaaggagaaaccgaagcctaccccagactatctcatgcag
ctcatgaatgataagaaactgatgagcagcctacccaacttctgcggaatttttaaccac
ctcgaacggctgcttgatgaagagatcagccgtgtacggaaggacatgtacaacgacacg
ctaaacggcagcacagagaagcggagcagtgagctcccagacgcagtgggccccatggtg
cagctccaggagaaactatttgtgcctgtgaaagagtaccccgattttaactttgtgggc
cgtatcctgggaccacgggggctgacagccaagcagctggaggcagagacaggatgtaaa
atcatggtgcgcggaaaaggctccatgagggacaagaagaaggaagagcagaaccgcggc
aaacccaactgggagcacctcaacgaggacctgcatgtcctgatcacagtggaggacgca
cagaaccgcgctgagatcaagctgaagcgggctgtggaggaggtcaacaaactactggtg
cctgcggcggagggagaggacagcctgaagaagatgcagctgatggagctggccatcctc
aacggcacctaccgagacgccaacatcaagtcacctgcccttgccttctctcttgcagcg
aacgcccaggcgccccgcatcatcgccggccccgcccccatgccccagaacgccctgcgc
acttccaccccggccggccccaccctaatgcccctgatccgacagatccagacctgcatg
cccaacggctcgccccacccgggcgtcatgacccagggtcccgagtcgggcctcatatac
gcgtcaccgtacgattacccctacacgctggcccctgccacctccatcctggagtacccc
atcgactccagcggggtgttaggtaagcatgcgtgcccctgtgattgccccgcagccccc
caccaacaccaccacccccatggccagtggaatcccgcccccacgctgatcctgcgccac
tcctcctaa
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