KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112253313
Entry
112253313         CDS       T05605                                 
Name
(RefSeq) protein quaking-B isoform X1
  KO
K14945  protein quaking
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112253313
Spliceosome [BR:otw03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    112253313
SSDB
Motif
Pfam: STAR_dimer KH_1 KRR1-like_KH2
Other DBs
NCBI-GeneID: 112253313
NCBI-ProteinID: XP_042179142
LinkDB
Position
LG01:55153519..55265386
AA seq 342 aa
MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
LNGSTEKRSSELPDAVGPMVQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK
IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVNKLLV
PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAANAQAPRIIAGPAPMPQNALR
TSTPAGPTLMPLIRQIQTCMPNGSPHPGVMTQGPESGLIYASPYDYPYTLAPATSILEYP
IDSSGVLGKHACPCDCPAAPHQHHHPHGQWNPAPTLILRHSS
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggttggggaaatggaaacgaaggagaaaccgaagcctaccccagactatctcatgcag
ctcatgaatgataagaaactgatgagcagcctacccaacttctgcggaatttttaaccac
ctcgaacggctgcttgatgaagagatcagccgtgtacggaaggacatgtacaacgacacg
ctaaacggcagcacagagaagcggagcagtgagctcccagacgcagtgggccccatggtg
cagctccaggagaaactatttgtgcctgtgaaagagtaccccgattttaactttgtgggc
cgtatcctgggaccacgggggctgacagccaagcagctggaggcagagacaggatgtaaa
atcatggtgcgcggaaaaggctccatgagggacaagaagaaggaagagcagaaccgcggc
aaacccaactgggagcacctcaacgaggacctgcatgtcctgatcacagtggaggacgca
cagaaccgcgctgagatcaagctgaagcgggctgtggaggaggtcaacaaactactggtg
cctgcggcggagggagaggacagcctgaagaagatgcagctgatggagctggccatcctc
aacggcacctaccgagacgccaacatcaagtcacctgcccttgccttctctcttgcagcg
aacgcccaggcgccccgcatcatcgccggccccgcccccatgccccagaacgccctgcgc
acttccaccccggccggccccaccctaatgcccctgatccgacagatccagacctgcatg
cccaacggctcgccccacccgggcgtcatgacccagggtcccgagtcgggcctcatatac
gcgtcaccgtacgattacccctacacgctggcccctgccacctccatcctggagtacccc
atcgactccagcggggtgttaggtaagcatgcgtgcccctgtgattgccccgcagccccc
caccaacaccaccacccccatggccagtggaatcccgcccccacgctgatcctgcgccac
tcctcctaa

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