Oncorhynchus tshawytscha (Chinook salmon): 112254658
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Entry
112254658 CDS
T05605
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112254658
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112254658
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
ATP-synt_B
IQ
Neur_chan_memb
Dynamin-like_hel_bact
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
112254658
NCBI-ProteinID:
XP_024283171
LinkDB
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Position
LG07:47012416..47130513
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AA seq
1982 aa
AA seq
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MAAPGLAPPGPDSFKLFTPESLLTIEERQFQEKIKKKPKPKSDSSHREEEEEEPMPNGDL
EAGKSLPFIYGDIPNGLVAVPLEDLDPYYMNEKTFIVLNKGKTIFRFHATDSLYVISPFS
HFRRIAIKILIHSYPFNMIIMSTILTNCVFMTFSDPPEWNKIVEYTFTGIYTFESLTKIV
ARGFCIDGFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALVQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPINSTENYLANGSK
GFDWTEYIMNSTNFYILPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGW
AFLTLFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQN
QATIEEAEQKEAEFKAMLEQIKNQQEDAQAAAMATSAGTVSVGDAVEGGDATEGGGQLSR
SSSEASKLSSKSAKERRNRKKKSRQKEEEKKEKGEKGEKVDHEKHVKSESDDGSKRSIFR
FPGSRLGRKTSIMNQSLLSIPGSPFMSRHNSRSSIFSFNKGRPPKDVGSENEFADDEHST
VEESEDRRGSLFIPYRRSSYSGYSQGSSRLISPLAPHTGGKRNSTVDCNGVVSLIAHQPG
GRLLPETTEVEGKKKHSGSLMVSVDQLGRNKDRANSVMSVATHTHSHTLLEELEDSQRAC
PSWWYKFANMFCVWDCFPIWLKIKHVLNLIVMDPFVDLAVTICIVLNTLFMAMEHYPMTP
RFEETLSVGNLVFTGIFAGEMFAKLAAMDPYYYFQEGWNCFDSFIVTLSLVELVLADIEG
LSVLRSFRLLRVFKLAKSWPTLNMLIKIIHSSVGALGNLTLVLALIVFIFAVVGMQLFGK
NYKDCVCKIAISCKLPRWHMNDFFHSFLMVFRVLCGEWIESMWDCMEVAGQNMCMIVFLM
VMVIGNLVVLNLFLALLLSSFSADNLAPSDDDGEQNNLQIAVGRIKTGIAWAKVFVAEVM
KKEEEEAEDEQKPLDEFDEKLNCIANQKGIDINRELDYINGTTSGIGSSVGKYMIDEDHM
SFIHNPNLTVCVPIAVGESDFDNLNTEDFSSESDAENSKDLDDTSSSEGSTIDIKLDVEE
VVVVEVVEEFLDPDACWTDECVAKYTFLYLPIDHGWGKHWWFLRKTSYLIVEHNWFETVI
IFMILLSSGALAFEDVYINKRKTIKIILEYADSVFTYIFILEMVLKWVAYGWVKYFTNAW
CWLDFFIVDVSIITLIANAMGYSDLGPVKSLRTLRALRPLRALSRFEGMRVVVNALVGAI
PSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEENFKPDVVNNKTECFALINANY
SEVRWKNVKINFDNVAAGYLALLQVATFKGWMDIMYAAIDSRKVEDQPIYEDNIYMYIYF
VAFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYHTAMKKLGSKKPQKPI
PRPLNNFQGLVFDFVTQQVFDISIMMLICLNMVTMMVETDDQSEDTDTILYWVNFVFIVA
FTTEFVLKLFALRHYYFTIGWNIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARI
GRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDD
MYNFETFGNSMICLFMITTSAGWDGLLLPILNYPPDCDPQLENPGAPNTGDCGNPSVGIF
FFVMYIIVSFLIVVNMYIAIILENFGVATEESADPLSEDDFTTFYEIWEKFDPDASQFIT
YGKLGDFADYLEHPLRVPKPNTIELISMDLPMVSGDRIHCLDILFAFTKRVLGDTGELDM
LRDQMEQRFIAANPSKVSYEPITTTLRRKQEDVSAKIIQQAYRNYLARRGFKCKRRPANN
NNVKNGGTNPEKEKKEGTPSTASLPSYDSVTKPDKEKQDENEGKAGRKEKGRNQKSVRES
KC
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcccggtctcgcacccccaggacctgacagcttcaagctgttcacccccgag
tcgctccttactatcgaggagcgccaattccaggagaagatcaagaaaaagcccaagccc
aagtctgacagcagtcaccgcgaggaagaagaggaagaacccatgcccaatggtgatctg
gaggcggggaagtccctccctttcatctacggggacatccctaatgggctggtggcggta
ccactggaggacttggacccttattatatgaatgagaaaacatttatagtcctaaacaaa
gggaaaacaatcttccgcttccacgccacggactccttgtacgtcatcagcccttttagt
cactttaggcgaatagcaattaagattttgatacactcatatcctttcaatatgatcatc
atgagcaccattttgaccaactgtgttttcatgacatttagtgatcctccagaatggaac
aagatagtagagtataccttcacaggtatctacaccttcgaatcacttaccaagattgtg
gcgcgaggcttttgtatagacgggttcacttttctacgagatccatggaactggctggac
ttcatggtgatctctatggcatatgtaacagaatttgtggacctggggaatgtctcggcg
ctgagaacgttcagagttctccgagcattgaaaactatttctgtgattccaggactcaag
accatcgtcggtgctctagttcaatccgtcaagaaattgtcagacgttatgatcctcacg
gtcttctgtctcagtgtcttcgctttgattggactacagctcttcatgggcaacctgcgg
cagaaatgtgtcatctggccaatcaactccactgagaactacctggccaatggcagcaag
ggcttcgactggaccgaatacatcatgaacagcaccaacttctacatccttcccgggcag
ctggatgctctgctgtgtggaaacagctcagactcagggcggtgccctgagggctacacg
tgtatgaaggccgggagaaacccaaactacggctacaccagctttgatagcttcggctgg
gccttcctcactctcttccgcctcatgacccaagacttttgggagaacctctacatgttg
actctgcgagcggcagggaaaacctacatgatcttctttgtgctggtgattttcgttgga
tccttctacctggtcaatctgatcctggctgtggtggccatggcctatgaggagcagaat
caggcgacgatagaggaggctgagcagaaagaggccgagttcaaagccatgctggagcag
atcaagaaccagcaggaggatgcacaggctgctgccatggcgacctcggcgggcacggtt
tcggtgggcgatgcggtagaggggggagacgcaacggagggcggtggacaattatcacgc
agctcctccgaggcgtccaagctcagctccaagagtgcgaaggaacgacgcaaccgcaag
aagaagtcacgtcagaaagaggaggagaagaaggagaagggagagaagggcgagaaggtc
gaccacgagaagcatgttaagtcagagtcagacgacggcagcaaaaggagcatcttccgt
ttcccgggcagccggcttggacgcaaaacgtccatcatgaaccagtctctcctctccatc
ccgggctctccattcatgtcgcggcacaacagccgtagcagcatcttcagcttcaacaag
ggccgccctccaaaggacgtgggctcggagaacgagtttgccgacgatgagcacagcacg
gtggaggagagcgaggaccgccggggctccctgttcatcccctaccgccgtagcagctac
agcggatacagccagggctcatcgcgtctcatcagcccactggcgccccacaccggaggg
aagaggaacagcacggtggactgcaacggcgtggtgtcgctcatcgctcaccagccaggc
ggacgccttctgcctgagaccacagaggtggaggggaagaagaaacactcaggctccctg
atggtgtctgtggaccagcttggccgcaacaaggaccgcgccaacagtgtgatgagcgtg
gccacacacacacactcgcacactctactggaggagctagaggattctcagagggcgtgc
ccatcatggtggtataagtttgccaacatgttctgtgtgtgggactgctttcctatctgg
ttgaagatcaagcatgtgctcaacctgatcgttatggacccctttgtggatctggctgtc
accatctgtattgttctcaacaccctcttcatggccatggaacactaccccatgactcct
cgctttgaggagacgctgtcagtgggaaatctggttttcactggtatctttgctggtgag
atgtttgccaagctggctgccatggatccatactactacttccaggagggctggaattgt
tttgacagcttcattgtgaccctcagtttagtcgagctggtattggctgacattgagggt
ctgtctgtgctcaggtcattccgattgctgagagtgttcaagctggccaagtcgtggccc
acactcaacatgctgatcaaaatcattcactcttctgtgggagccctgggaaacttgacc
ttggtgctggcccttatcgtcttcatcttcgccgtggttggcatgcaactgtttggaaag
aactacaaggactgtgtttgtaagatcgctataagctgtaagcttcctcgttggcacatg
aacgacttctttcactcatttctcatggtgtttcgagttctgtgtggggagtggatcgag
tccatgtgggactgcatggaggtggccggccagaacatgtgcatgatcgtcttcttgatg
gtcatggtcataggcaacttggtggtgttgaacctgttccttgccttgttgctgagctcg
ttcagcgcagacaacctggcaccctcggacgatgacggagaacagaacaatttgcaaata
gctgtcggtcgaataaagacggggattgcctgggccaaggtctttgtagccgaggttatg
aagaaggaggaggaagaagcagaggacgaacagaagcctcttgatgagtttgacgagaag
cttaactgcattgcaaaccagaagggcatagacatcaaccgtgagttggactacatcaat
ggcactaccagcggcatcggcagcagcgtgggcaagtacatgatcgacgaggaccacatg
tccttcatccacaatcccaacctaaccgtgtgcgttcccattgcggtcggggagtcagac
ttcgataacctcaacactgaggacttcagcagcgagtcagacgcggagaacagcaaagac
cttgatgacaccagctcttcggagggcagcaccatagacatcaagcttgacgtggaggag
gtggtggtggtggaggtcgtggaggagttcctggacccagacgcctgctggacagatgaa
tgtgttgccaagtatacgtttttgtacttgcccatcgaccatggctgggggaagcactgg
tggttcctgaggaagacaagctacctgatcgtggagcacaactggtttgagaccgtcatc
atcttcatgatcctgctcagtagcggggcgttggcctttgaggatgtgtacataaataag
aggaagaccatcaagattatcctggagtacgccgacagcgtgttcacctatatcttcatc
ctggagatggtgctcaaatgggtggcctatggttgggtcaagtacttcaccaacgcctgg
tgttggctggacttcttcattgtggatgtgtctataatcactcttatagctaatgcgatg
ggctactccgatctagggcccgttaaatcactacggacattgagggccttgaggcccctt
agggccctgtctcgctttgaagggatgagggtggtggtgaatgccttggtgggagccatc
ccctccatcatgaacgtgctgctggtgtgcctcatcttctggctcatcttcagtatcatg
ggggtcaacctgtttgcagggaagtattactactgcttcaacgagacctcagaggagaac
tttaaacccgacgtcgtcaacaacaagactgagtgctttgcactaatcaacgcaaattac
agtgaggtcaggtggaagaatgtcaagattaactttgacaatgtggctgcaggatacctg
gcacttctacaagtggccacgtttaaaggctggatggacataatgtatgcggccattgat
tctcggaaggtggaggaccagccgatctatgaagacaacatctacatgtatatctacttt
gttgccttcatcatctttggctctttctttaccctcaatctcttcattggtgtcatcatt
gacaactttaaccagcaaaagaaaaagtttggaggtcaggatatattcatgacagaagag
cagaagaaataccacactgccatgaaaaaacttggctcaaaaaaaccacaaaaacctatt
ccgagaccactgaataactttcagggcctggtatttgacttcgtaacgcagcaggtcttt
gatatatctattatgatgttgatctgcctcaacatggtgaccatgatggtggagacggac
gatcagtcagaagatactgacactattctctactgggtcaacttcgtcttcatcgttgcc
tttactaccgagtttgtgttaaagctctttgcccttcgccactactacttcaccattgga
tggaacatctttgacgtggttgtggtcattctctcaattgttggcatgttcctcgcagac
atcattgagaagtactttgtctctccaaccctcttcagggtgatccgactggcccgaatc
ggcagaatcctgcgtctgatcaaaggggccaagggcattcggactctactgtttgccctg
atgatgtcccttcctgctctgttcaacatcgggttgttactcttcctggttatgttcatc
ttctctatttttggcatgtctaactttggctatgtcaagcatggggcaggaatcgacgac
atgtacaactttgagacatttggcaacagcatgatctgcctgtttatgatcactacgtct
gccggctgggacggtttgttgttacccatcctcaactaccccccagactgtgacccacaa
ctggagaacccaggtgcaccgaatacaggcgactgcggcaatccctcggtagggattttc
ttcttcgtcatgtacattatcgtctccttcctaattgtggtcaacatgtacattgccatt
atccttgagaacttcggcgttgcgactgaagagagtgccgacccgctcagcgaagacgac
ttcacgaccttctacgaaatatgggagaagttcgacccagacgcctcgcagttcatcacc
tatggcaagcttggtgactttgcagactacctagagcacccactccgtgttccaaagccc
aacactatagagctgatctccatggacttgcccatggtgagcggggaccggatccactgc
ctcgacattctgtttgcattcaccaagcgggtactaggcgataccggagagctggacatg
ctgagggatcaaatggaacagcgctttattgcggcgaacccgtccaaagtgtcttatgag
cccattaccactactctgaggcgcaagcaggaggacgtgtcggccaaaatcatccagcag
gcctatcgaaactacctggctagacgtggcttcaaatgcaagcgcagaccggccaataac
aataatgtaaagaatggtgggacgaatccggaaaaggaaaagaaggagggcacgccctcc
actgcctctctcccctcctatgacagtgtaaccaaacctgacaaggaaaaacaggatgag
aatgaaggaaaggcagggaggaaggagaagggcagaaaccaaaaatccgtcagggaatct
aagtgttag
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