Oncorhynchus tshawytscha (Chinook salmon): 112256135
Help
Entry
112256135 CDS
T05605
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112256135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112256135
03012 Translation factors [BR:
otw03012
]
112256135
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112256135
Translation factors [BR:
otw03012
]
Eukaryotic type
Release factors
112256135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
112256135
NCBI-ProteinID:
XP_024284914
LinkDB
All DBs
Position
LG08:62978583..62986002
Genome browser
AA seq
443 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLYVANDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRLHGAESVGTENDEKTLYLTPEQEKDK
SHFTDKETGQDHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGCLR
YRVDFQAIDYQAEDDDCFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaccctaacgcggcagacaggaacgtggagatatggaaaatcaagaaactg
attaaaagtttggaagctgcccgtggtaatggaaccagtatgatctcgctgatcatcccc
cctaaggaccagatctccagagtggccaagatgttggcagatgagtttggcacagcctcc
aacatcaagagcagagtcaacaggctctctgtgctcggggccatcacctctgtacagcag
agactaaagctatacaacaaggtgccgcctaatggcctggtggtgtactgtggaaccatc
gtgacagacgagggcaaagagaagaaagtcaacattgactttgagccttttaaacccatc
aacacctccctgtacctctgtgacaacaagttccacactgaggcgttgacagccctgctg
tctgatgacagtaagtttggcttcatagtgatagatggtagtggggctctattcgggacg
ctccaggggaacactagagaggtcctgcacaagttcactgtggacttgcccaagaaacac
ggcagaggaggtcagtctgctttgcgctttgcccgtctgaggatggagaagagacacaac
tatgtgaggaaggtggctgagacagctgtccagctctatgtggccaacgacaaggtcaat
gtggccggaatggtcctagcagggtctgccgacttcaagactgagctcagccagtccgac
atgttcgaccctaggttacaggcaaagattctaaagctggtggacatctcgtacggaggg
gagaacggtttcaaccaggccatcgagctgtcggcagaggtcctctctaacgtcaagttc
atccaggaaaagaagctcataggccggtactttgatgagatcagtcaggacacggggaag
tactgttttggggtggaggacacactcaaagccctggagatgggggctgtggagatcctc
attgtttatgagaacctagacaccatgcgctatattcttcgcctgcacggggctgagagc
gtcggaacagaaaacgatgagaagactctttatttaacaccagagcaggagaaggacaag
tcccacttcacagacaaggagactgggcaggaccacgagttgattgaaagcatgcctctg
ctggagtggtttgccaacaactacaagaagtttggagccacgctggagatcgtcacagac
aagagtcaggaagggtctcagtttgtcaagggcttcggtggcatcgggggatgcttgcgg
tacagggtggatttccaggccatagattaccaggcggaggacgacgactgttttgattta
gatgactactag
DBGET
integrated database retrieval system
