Oncorhynchus tshawytscha (Chinook salmon): 112256307
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Entry
112256307 CDS
T05605
Name
(RefSeq) polycomb group RING finger protein 1 isoform X2
KO
K11487
polycomb group RING finger protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112256307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112256307
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
112256307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
TRAF3_RING
zf-Nse
zf-ANAPC11
zf-C3HC4_4
ubiquitin
APG12
GH3_N_vert
Zn_Ribbon_1
zf-RING_10
EHMT1-2_CRR
Motif
Other DBs
NCBI-GeneID:
112256307
NCBI-ProteinID:
XP_024285231
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All DBs
Position
LG08:complement(55400512..55405879)
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AA seq
262 aa
AA seq
DB search
MAEQGPMAIAMRLRNQLQSVYKLDPLRNEEEVKLKIKDLNEHIVCYLCAGYFIDATTITE
CLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQESEDKR
IKEFYQSRGLERVVQPSGEDSIPDATGLPFTTFDHSKAHFYRYDEQVSLCLERQSLSLSG
KKDKTKLTLQQKFVRCSVRAEVRHLRKVLCHRLNVEKHQVQMFFNNEFLPDHMTMKRLWL
SHWFGKAQPLVLHYTIKDKRTR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaagggccaatggcgatagctatgcggctaagaaatcaactccagtccgta
tataagctcgaccctttacgaaatgaggaggaagtcaagttgaagatcaaagacctgaac
gagcacatagtgtgctatctctgtgctggatacttcatcgatgccacaactattacagag
tgtctgcatacattctgtaaaagttgcattgtgaaatacctccaaaccagcaagtattgt
ccaatgtgcaacataaagatccacgaaacacagcctttattgaacctgaaattggataga
gtaatgcaagacattgtctacaaactggttccaggacttcaagaaagtgaggacaagcga
attaaagaattctatcagtcgcgtgggcttgagagagttgtccaaccctctggagaagac
tccataccagatgctacaggattacctttcaccacctttgaccattccaaggcccacttt
tacagatacgacgagcaggtctcgctttgtctagagaggcaaagtttatctctgtctgga
aaaaaagataagacaaaactgactcttcagcagaagtttgtgcgctgctcggtccgagcc
gaggtgagacacctgcgtaaagtgctgtgtcatcgactgaatgtggagaagcaccaggtc
cagatgtttttcaataatgagttccttccagatcacatgaccatgaaacggctgtggctc
tctcactggtttggcaaggctcagccgttggtccttcactacacgatcaaggacaaaagg
acaagatag
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integrated database retrieval system
