Oncorhynchus tshawytscha (Chinook salmon): 112257177
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Entry
112257177 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112257177
04082 Neuroactive ligand signaling
112257177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112257177
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112257177
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112257177
NCBI-ProteinID:
XP_042182189
UniProt:
A0A8C8CEW2
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Position
LG08:15060267..15080246
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AA seq
502 aa
AA seq
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MLVRGTMPYLTKPLFLLFCLVVTGECRRLGHRVRRWTETVETAKLGPETTKHGPSLTKKP
PDVTKNRKLKTEQLLKVDDHDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYL
RHYWKDERLSFTSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTVNIMLRVFPDG
HVLYSLRVTVTAACNMDFSRFPLDTQSCSLELESYAYTDEDLMLYWKSGDESLSTDDRIS
LSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFW
IDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAA
VNYLSTAQDRRERKMRDEMRERARSQSLPCTCGMSQTRTMLLDGTYSEADTNSLAGYTSG
TMGPEEDMDMPRDMMTEKQPPGEHTVVHLSASSESTTTKKKGIRALNIIQNTHTIDKYSR
MLFPGSYILFNIIYWCSYCLGA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtccgtggcacgatgccttatctgactaaaccgctgtttttactcttctgtttg
gtcgttaccggggaatgccgtaggcttggacaccgagtacggagatggacggaaaccgtg
gagacggcaaagcttggaccagagaccacaaagcatggcccttccttgacaaagaaacct
ccagatgtgaccaagaatcgcaagctgaagacagagcagcttctgaaagtagatgatcat
gatttcaccatgaggccggcatttggaggccctgctatcccagtcggagtggacgtacag
gtggagagcctggatagcatctcagaagtagacatggacttcaccatgaccctgtacctg
agacactattggaaggacgagcgtctgtccttcaccagctccaccaataagagcatgaca
tttgacgggcgtctggtcaagaagatctgggtgcccgatgtgttcttcgtccactccaag
agatccttcatccacgacaccaccacagtcaacatcatgctcagggtctttcccgacgga
cacgttctgtacagcctgagggtgacagtgacagcagcctgtaacatggacttcagccgc
ttccctttggacacccagtcctgctccctggagctagagagctatgcatatacggatgag
gacctgatgctgtactggaagagtggggatgagtccttgagtacggatgaccgtatctcc
ttgtctcagttcctcatccagaagttccacaccacatctcggctggccttctacagcagt
actggctggtacaaccgtctgtacatcaacttcaccctgcggagacacatcttcttcttc
ctgcttcagacctacttcccggctaccctcatggttatgctgtcttgggtgtccttctgg
atcgaccgcagggccgtcccagctcgtgtctccctgggtatcactacagtgctcaccatg
tccaccatcatcactggagtcaacgcctccatgcccagagtatcctacatcaaagcagtg
gacatctacctgtgggtcagcttcgtgtttgtcttcctgtctgtcctggagtacgctgct
gtcaactacctgtccactgcacaggaccgcagggaacgcaagatgagagacgagatgagg
gaaagggccaggtcacagtcgctgccctgcacctgtggcatgtcccagaccaggaccatg
ctattagacgggacctacagcgaggcggacactaacagcctggccggctacacctcagga
actatggggcccgaggaggacatggatatgccccgcgacatgatgactgagaagcagcct
cctggagaacacacagtggtccacctgtctgccagcagcgagtcaacgacaaccaagaag
aaaggcatcagggccctcaatattatacagaatacacacaccatcgacaagtactccagg
atgttattccctggctcctatatcctattcaacataatctactggtgttcatactgttta
ggagcgtag
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