Oncorhynchus tshawytscha (Chinook salmon): 112257787
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Entry
112257787 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2 isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112257787
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112257787
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112257787
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
112257787
NCBI-ProteinID:
XP_042182726
UniProt:
A0A8C8HIN3
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All DBs
Position
LG09:complement(30882434..30906075)
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AA seq
321 aa
AA seq
DB search
MSHPSSAGGGGGGLGAGKAGGGKHGGSGGAAAAAAAVAAAAAGVGAVAGSVSALPAAVVS
LPSAALPGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPS
IRNLAMEKVASTLPFPCKYASAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSL
EAVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEG
HQQFFAVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDT
SIAHLFADNGNLGINVTISMC
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccgtcctctgcgggcggcgggggcggaggacttggtgccgggaaagcagga
ggaggaaagcacggaggttcgggaggagctgcggccgccgctgctgcagtcgccgccgcg
gccgccggagtaggagctgtggccgggtctgtctcggctctacctgccgctgttgtttcc
ttgccctcagcagcactacctggacaatctgctgaacttacagccttgtttgagtgcccg
gtttgttttgactacgttctgccaccgattctgcaatgccaggccgggcatctagtttgc
aaccaatgtcgtcaaaagctaagttgttgtccaacttgtcgaggccctcttaccccgagt
atcaggaacttggctatggaaaaagttgcctctactctaccgtttccttgtaagtacgca
tcagccggctgcctgttgtccctccaccacagtgagaagcctgaacacgaggaagtgtgt
gagttccgtccctacacctgcccgtgccccggagcttcctgtaagtggcagggctccctg
gaggctgtcatgccccacctgatgcatgcccacaagtccatcaccaccctgcagggagag
gacatcgtcttcctggccacagacatcaacctgccgggggctgtggactgggtcatgatg
cagtcctgcttcggccaccactttatgctggtcctggagaagcaggagaagtacgagggc
caccagcagttctttgccgtggtgctgctcatcggaacgaggaagcaggcagagaacttc
gcctaccgcctggagctcaacgggaaccggcggcgcctcacctgggaggccacgccccgc
tccatccacgacggcgtggcggccgccatcatgaacagcgactgtctggtgtttgacacg
tccattgctcacctgtttgctgacaacggcaacctggggatcaacgtcaccatctctatg
tgctga
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