Oncorhynchus tshawytscha (Chinook salmon): 112257863
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Entry
112257863 CDS
T05605
Symbol
ubb
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-B
KO
K08770
ubiquitin C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320
PPAR signaling pathway
otw04120
Ubiquitin mediated proteolysis
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112257863 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112257863 (ubb)
04137 Mitophagy - animal
112257863 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
112257863 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112257863 (ubb)
Ubiquitin system [BR:
otw04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
112257863 (ubb)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
112257863
NCBI-ProteinID:
XP_042182764
LinkDB
All DBs
Position
LG09:35408962..35412677
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AA seq
761 aa
AA seq
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MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITREVEPSDTIENVKAKIQDKEGXPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGXPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLXGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGP
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgacaggcaagaccatcaccctcgaggttgagccaagc
gacaccattgagaacgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatctttgccggcaagcagctagaagatggccgcaccctctcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaaaaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aacgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctgatc
tttgccggcaagcagctagaagatggccgcaccctctcagactacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccattgagaacgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatctttgccggcaag
cagctagaagatggccgcaccctctcagactacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctgacaggcaagacc
atcaccctcgaggttgagccaagcgacaccattgagaacgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagaggctgatctttgccggcaagcagctagaagat
ggccgcaccctctcagactacaacatccagaaagaatccaccctccatcttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaaaaccctgacaggcaagaccatcaccctcgag
gttgagccaagcgacaccattgagaacgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatctttgccggcaagcagctagaagatggccgcaccctc
tcagactacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggc
atgcagatcttcgtcaaaaccctgacaggcaagaccatcacccgagaggttgagccaagc
gacaccattgagaacgtgaaggccaagatccaggacaaggagggcnatcccccagaccag
cagaggctgatctttgccggcaagcagctagaagatggccgcaccctctcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaaaaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aacgtgaaggccaagatccaggacaaggagggcnatcccccagaccagcagaggctgatc
tttgccggcaagcagctagaagatggccgcaccctctcagactacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccattgagaacgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatctttgccggcaag
cagctagaagatggccgcaccctctcagactacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctgacaggcaagacc
atcaccctcgaggttgagccaagcgacaccattgagaacgtgaaggccaagatccaggac
aaggagggcnatcccccagaccagcagaggctgatctttgccggcaagcagctagaagat
ggccgcaccctctcagactacaacatccagaaagaatccaccctccatcttgtgctgcgt
ctcnagggaggcatgcagatcttcgtcaaaaccctgacaggcaagaccatcaccctcgag
gttgagccaagcgacaccattgagaacgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatctttgccggcaagcagctagaagatggccgcaccctc
tcagactacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggagga
ccttaa
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