Oncorhynchus tshawytscha (Chinook salmon): 112259889
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Entry
112259889 CDS
T05605
Name
(RefSeq) ras-related protein Rab-4A-like isoform X1
KO
K07879
Ras-related protein Rab-4A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112259889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259889
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
otw04031
]
112259889
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
112259889
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
112259889
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
ATP_bind_1
Gtr1_RagA
AAA_7
AAA_22
SLFN-g3_helicase
AAA_16
SRPRB
ATPase
Septin
NACHT
Motif
Other DBs
NCBI-GeneID:
112259889
NCBI-ProteinID:
XP_024290340
LinkDB
All DBs
Position
LG01:89570163..89578005
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AA seq
228 aa
AA seq
DB search
MKQKECVSSANVNCSKLIKPDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEF
GSKIINVGNKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTD
ARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQC
ARKILNKIESGELDPERMGSGIQYGDAALRQLRSPRRGQAESAQECGC
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaaagaatgcgttagttcagctaacgtaaattgtagcaagctgattaaacca
gacttcctgttcaaattcctagtgattgggaatgccggaactggaaaatcatgtcttctt
caccagtttattgagaagagattcaaagacgattcaaatcacaccattggagtggagttt
ggctccaagataatcaacgtggggaacaaatatgtcaaactccaaatctgggacactgca
ggacaagagagattcagatctgtgacacgaagttactacagaggcgctgcaggagcgctg
cttgtgtatgacatcaccagccgggaaacctacaacgccctgaccaactggctgacagac
gccaggatgctggccagccaaaacattgtcatcatcctgtgtggtaacaagaaggacttg
gatgcagacagggaggtcaccttcctggaggcatctcgctttgctcaggaaaatgagctg
atgtttctggagaccagtgctctgacaggggagaacgtggaggaagcctttgtgcagtgt
gctaggaaaattctcaacaagatagagtcgggagagttggacccggagcggatgggatca
gggatccagtacggagacgcggcgctgcgacagctgcgctcccctcgcaggggacaggcc
gagagtgcccaggaatgtggctgttag
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