Oncorhynchus tshawytscha (Chinook salmon): 112260161
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Entry
112260161 CDS
T05605
Name
(RefSeq) phakinin isoform X1
KO
K10379
phakinin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112260161
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Others
112260161
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Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC22_CC
AAA_13
PUMA_CC
Sec8_N
FKBP15
ANC1_spectrin
DUF5798
Sec66
Alpha-2-MRAP_C
TPR_MLP1_2
TetR_C_13
Laminin_II
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
112260161
NCBI-ProteinID:
XP_024290825
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All DBs
Position
LG10:35882961..35888607
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AA seq
439 aa
AA seq
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MPLPRRRSSFLGQHSAAERLGSASTRAGTAGITTAPRGVFVGTAPTGGTCSLGTRVSRRA
LGISSVFLQGLRSTAVPVMPHGAGAGGRQHPGGTESLNCCLMEYRDKVHALELLNQQLEE
QIRHCLDRKASSAGAWGPLRQDWEDVYRQVSESILDNARLMLQTENVQANTEDFKDRYEN
EQPFRKAAEEEISSLYKVIDDANLTKSDLESQMDSMRAELRDLARNHEEDVRVLYNQMAG
RDVDEPDAPIETNLDQILAYIRSHWETVIEKNRAETDAYLEYKQEESVGSKLSHEEEELE
SLKTEYNDAGCKIQSLQAETESIRALKRGLENSLNDAKHWHDIELQNLGSVIGKLESELG
DVHGDIEQQRRDYETLLGNKMRLELEIGTYHGILDGEESRYHPSMCTGASEPEGKRTPLR
PHLEPHGGPAPQGSNTSSY
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgccaagacgtcggtcctccttcttgggccagcactccgctgcagagcgcctg
ggtagcgccagcaccagggctggcaccgcgggcatcaccacagccccccggggcgtcttt
gtggggacagcccccacgggcggcacctgcagcctgggcacgcgagtgtcgcggcgtgcc
ctgggcatcagcagtgtgttcctgcaggggctgaggagcacggctgtgcctgttatgccc
catggggctggggctggtggcaggcagcaccccgggggtactgagagccttaactgctgc
ctgatggagtacagggacaaggtgcacgccctggagctgctcaaccagcagctggaggag
cagatccgacactgcctggatcgtaaggcgtccagtgccggagcctggggtcccctcaga
caggactgggaggacgtctacaggcaggttagtgagtccatccttgacaatgccaggcta
atgctgcagacagagaatgtgcaggccaacactgaggacttcaaggaccggtatgagaat
gagcagcccttcaggaaagcggctgaggaggagatcagctctctgtacaaggtgattgac
gatgccaacctgaccaagtcagacctggagagccagatggacagcatgagggctgagctc
cgagacctggcccgcaaccacgaggaggacgtgagggtgctatacaaccagatggcaggc
cgtgacgtggacgaaccggacgctcccattgagaccaatctggaccagatactggcctac
atccgctcccactgggaaacagtcatcgagaagaaccgtgctgagaccgatgcctacctg
gaatacaagcaggaggagagtgtgggcagtaagctgagtcatgaggaggaggagctggag
agtctgaagacggagtataacgatgctggttgtaaaatccagagtttgcaggccgaaacc
gagtccatcagagcactgaagcgcggcctggagaactccctgaacgacgccaagcattgg
catgacatcgagttgcagaacctgggatccgtcattggcaagctggagtcagagctgggc
gacgtccatggcgacattgaacagcaacgccgtgactatgagacgttgctgggcaacaaa
atgcgcctggagctggagatcggcacctaccacggcatcttggatggggaggagagccgc
taccacccctcgatgtgcacaggtgcatcagagcctgaagggaaacgaactccacttcgt
ccccatttggagccccacggcggcccagcacctcaaggttccaacacatctagttactag
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