Oncorhynchus tshawytscha (Chinook salmon): 112262236
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Entry
112262236 CDS
T05605
Symbol
chrna2a
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2a
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112262236 (chrna2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112262236 (chrna2a)
Ion channels [BR:
otw04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112262236 (chrna2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Glycoprotein
Motif
Other DBs
NCBI-GeneID:
112262236
NCBI-ProteinID:
XP_042186528
UniProt:
A0A8C8EJ43
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Position
LG11:49817850..49854090
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AA seq
555 aa
AA seq
DB search
MEGKSGYLLFTRTAVVYGLFLINPVLSDDWTHAHAEDKLFNRLFIGYNKWSRPVQNISDI
VIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWRPSDYDNVTSIRVPSELIWVP
DIVLYNNADGEFSVTHMTKAHLFHSGHVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGS
WTYDRAKIDLEPIGDTVDLKDYWESGEWAIVNAVGTYNTKKYDCCHEIYPDITYYFMIRR
LPLFYTVNLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSL
VIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSSATHTMPRWVRTLFLSVIPRWLCMKRP
PPDLRRRGLVCKLHPFGTFRMPGPSRSSSHSTAHTWLMRESDVDLHGNEDEDVIRRGYLD
TEMDAGLGVGLRLPPSFSFPPPSPRLPVYTPLIPKTHTTQRPPNLSLTPDWDYNPPGPDV
GMAPAPALSPAVLRALEGVMYIAEHLRAEDQDFSVKEDWKYVAMVIDRIFLWMFIIVCLL
GTIGLFLPPWLAGMI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaaaagcggatacctcttattcacgcgcaccgcagtggtttacggtttattc
ctcatcaacccggtgttaagtgatgactggactcatgcccatgcagaggacaagttgttc
aacaggctgttcattggctataacaagtggtcccgccccgtacaaaacatcagcgacatt
gtcatcgtcaagtttggtctgtccatcgcacagctcatagacgtggatgagaagaaccag
atgatgaccaccaacgtgtggctgaaacaggagtggagtgactataaactgcggtggcgt
ccatctgactacgacaacgtaacgtccattagagtaccttctgaactgatctgggtacct
gacatcgtcctctataacaatgcggatggtgagttttcagtgacccatatgaccaaggct
catctgttccatagtggtcatgtgcgctgggttcccccggccatctataagtcctcctgc
tctatagacgtcaccttcttccccttcgatcagcagaattgtaaaatgaagtttggctcc
tggacctacgacagagctaaaatagatctagagcctataggggatactgtggatctgaag
gactactgggagagtggtgaatgggctatagtgaacgcagtgggaacctacaacactaag
aagtacgactgttgccatgagatctaccctgatataacctactatttcatgatcagacgc
ctgcctctattctacactgtcaatcttattatcccttgtctcctcatctcctgtctcacc
gtcctggtgttctatctgccttctgattgtggagagaagatcaccctgtgtatctctgtc
ttactttctctcaccgtcttcctgctgctcatcactgagatcatcccctccacctcgctg
gtgattcctctcattggggaatatctccttttcaccatgatctttgtcactctgtctatt
gttataacggtgtttgtcctgaacgtccatcatcgttcctctgctactcacaccatgcct
cgctgggttcggacactgttcctgtctgtcattccccggtggctctgcatgaaacgaccc
ccacctgatctcaggaggaggggcttagtctgcaaactccaccccttcggaaccttcaga
atgcctggcccctctcgctcttcgtcgcattccacagctcacacctggctcatgcgggag
tccgatgttgatctccatggtaacgaggacgaggatgtgattcgccgtggttacttggat
acggagatggacgcggggttaggggtggggctgaggcttcccccatccttctcctttccc
cctccctctccccgcctgcccgtctacacccccctcatccccaagactcacaccacccag
cggccccccaatctgagtctgacccccgactgggattacaatcccccaggtcctgatgtt
ggtatggccccagctccagccctgtctcctgcagtgttgcgagccctggagggggtgatg
tacatcgctgaacacctcagagccgaggaccaagacttctctgtgaaggaggactggaag
tacgttgccatggtgatagatcgtatcttcctttggatgttcatcatcgtgtgtctcctg
ggaaccatcggattgttcttaccaccctggctggccggcatgatctag
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