KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112264607
Entry
112264607         CDS       T05605                                 
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112264607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112264607
Spliceosome [BR:otw03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112264607
 Complex B
    112264607
 Complex C
   U2 SnRNP specific factors
    112264607
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 112264607
NCBI-ProteinID: XP_024297096
LinkDB
Position
LG13:26003768..26009104
AA seq 501 aa
METILEQQRRYHEEKERLLDAKTKEMMHKKTTLREQINSDHRTRAMLDRYMDVSSTVREA
YEDKDGMRKDELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFDELVKARENP
TEETQNMVEFSDEEAYGRYLDLHDCYRKFINLKGAEKLEYISYLSSFDQLFDVSKDRKNA
EYKKYLEMLLEYLQDYTERVKPLLDQNDLYGKILGEFEKKWEMGTFPGWPKETSSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSL
FAKNPKSKGPKKDTERNKEVAFLESQVYEYVEILGEQRQLTHENVQRKQARTGEEREEEE
EEQLSESESEDEDNEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPK
AFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWSKLKSQKASERWQPDTEEEYE
DSSGNVVNKKTYEDLKRQGLL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggagacgattttagaacaacaacgtcgctaccatgaggagaaggaaaggctgttggat
gccaaaactaaggaaatgatgcataagaaaaccacgttacgcgaacaaataaactcagac
catcgaacaagagcaatgttggatagatacatggacgtgagctcaactgtcagggaagca
tatgaagacaaagatggtatgaggaaggatgaactgaacgccatctcaggaccaaatgag
tttgcagagttctacaacagactaaaacagatcaaggagttccacaggaagcatcctaat
gagatctgtgtgcccatgtctgtggagtttgacgagctggtcaaggctagagagaaccca
actgaagaaacacagaacatggtggagttcagtgatgaggaggcgtacggacgctacctg
gatcttcatgactgctatcggaagttcatcaacctgaaaggagcagagaaactggagtat
atcagctacctttcctcatttgaccagctgtttgatgtctccaaggacagaaagaatgct
gaatacaaaaagtacttagagatgctactggagtaccttcaggactacacagagagagtc
aaacctctgctggaccagaatgatctctacggcaagatcctgggagagtttgagaagaag
tgggagatggggaccttccctggctggccaaaagagacgagcagtgctctgacccacgcc
ggagctcatctagacctttctgctttctcctcttgggaggagttggcttccctgggtctg
gataggttgaagtctgcccttatggccctgggcctgaaatgtggaggaaccctggaagag
agagcccagaggctgtttagcaccaaaggaaaatccctggaatctctggatccctccttg
ttcgccaagaaccctaagtccaagggacccaagaaagacacagagcgtaacaaagaagtc
gccttcctggagtctcaggtttatgagtatgtggaaatcctgggggagcagaggcagctg
acccatgagaacgtgcagaggaagcaggccaggacaggagaggagagagaggaggaagag
gaggagcagctcagtgagagtgagagtgaagatgaggacaacgagataatctacaacccc
aagaacctgcctctcggctgggatggaaagcccattccatactggctgtacaaactccat
ggcctgaacatcaattataactgtgagatctgtggaaactacacatacagaggacccaag
gccttccagaggcactttgcagagtggcgtcacgcccatggcatgcgctgcctgggaatc
cccaacacggctcactttgccaacgtcacccagatcgaggacgctgtctctctatggtca
aagctgaagtcacagaaggcatcagagcgctggcaaccagatacagaggaggagtacgag
gactccagtggaaacgtggtcaacaagaagacctacgaggacctgaagagacagggtctg
ctgtag

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