Oscillibacter valericigenes: OBV_06260
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Entry
OBV_06260 CDS
T01636
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
ova
Oscillibacter valericigenes
Pathway
ova03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OBV_06260 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ova03400
]
OBV_06260 (uvrA)
DNA repair and recombination proteins [BR:
ova03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OBV_06260 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OBV_06260 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
RsgA_GTPase
AAA_21
AAA_22
AAA_25
BCA_ABC_TP_C
Zn-ribbon_8
APS_kinase
nSTAND3
DUF4350
Zn_Tnp_IS91
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
BAK97824
LinkDB
All DBs
Position
594113..596938
Genome browser
AA seq
941 aa
AA seq
DB search
MQDKIIVKGARANNLKNIDVTIPRDKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSS
YARMFLGQMDKPDVDYIDGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLWARAGTPH
CPKCGKEIRQQTIDQIIDQVLALPEGTRIQVMAPVARGKKGEYAKTFEDARKSGYVRVRV
DGSLYELDEEFKLDKNKKHNIEIVVDRLIIREDVRQRLTDSVETASSLTGGIVLVNLVRE
ERDLLFSQNYACEDCGISIEELAPRMFSFNNPFGACPACMGLGSQQKVDPALVVPDEEKS
ILDGAIQASGWNNIRGDGISRMYFEALAKKYHFSLTAPFKDLPEKIRAIIFYGTGDDKLD
LHYDQPRGKGVLHQPFEGICNNIERRYRETQSDSMKRELEDVMAQQPCPACEGKRLRKEA
LAVTVGGLSIYDFTQMSVVDELEWVNRLTLTQQQMLIADRILKEIRNRLGFLQSVGLGYL
TLSRSAGTLSGGESQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDKLLSTLKRLRDLG
NTLLVVEHDEDTMRAADYLIDVGPGAGIHGGEIVAAGTPEEVMANPKSLTGQYLSGKRKI
AVPEIRRKGSGNFLKVIGAAENNLKNVDVAIPLGTFTCVTGVSGSGKSSLVNEILFKKLG
AELMRMKTRPGRCKRIEGLEFLDKVVDIDQSPIGRTPRSNPATYTGLFNDIRDLFAATQE
ARSRGYGPGRFSFNVRGGRCEACSGDGLIKIEMHFLPDIFVPCEVCKGARYNRETLEVRY
KGKNIAQVLDMTVEEATEFFSALPKIFNKLQTLCDVGLGYVKLGQSSTELSGGEAQRVKL
ATELSKIATGRTIYILDEPTTGLHSEDVRRLLEVLQKLVEGGNTVLVIEHNLDVIKCADY
LIDLGPEGGDGGGNIVCTGTPEEVAACAESFTGQYLKKMLR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacaaaatcattgtaaagggcgcccgcgcgaacaatctgaaaaatatcgacgtg
accattccgcgggacaagctggtggtcctgaccggcctcagcggatcgggcaaatcctcc
ctggcctttgacaccatctatgccgagggccagcggcggtatgtggagagcctttcgtcc
tacgcccggatgtttctgggacagatggacaagccggatgtggactacatcgacggcctc
agcccagccatctccatcgaccagaagaccacgtccaaaaacccccggtccaccgtgggt
accgtgacggagatctacgactatctgcgccttctctgggcccgggcgggcacgcctcac
tgccccaaatgcggaaaagagatccggcagcagaccatcgaccagatcattgaccaggtg
cttgcgcttccggagggaacccgcattcaggtcatggccccggtggcacgggggaagaag
ggcgagtacgcgaaaacatttgaggacgcccgaaaatccggctatgtccgcgtccgggtg
gacgggtccctctatgagctggacgaggagttcaagctcgataaaaacaaaaagcacaac
atcgagatcgtggtggaccggctgattatccgggaggatgtgcgtcagcggctgacagac
tccgtggagaccgcctcgtcgctgacgggggggatcgttctggtgaatctggtccgggag
gagcgggatctgctattctcccagaattacgcctgtgaagactgcggcatctccattgag
gaactggctccccggatgttttcctttaacaatccctttggcgcctgccctgcctgtatg
ggtcttggaagccagcagaaggtggacccggcgctggtcgtgccggacgaggagaaatcc
attctggacggagctatccaggcctccggctggaacaatatccggggcgacggcatctcc
cggatgtactttgaggccttggcgaaaaaatatcatttctccctgaccgcgcccttcaag
gacctgccggagaagatcagagcgattattttttatggcaccggcgacgacaagctggac
ctgcactacgaccagccccggggcaagggcgtgctgcaccagccgtttgagggtatctgc
aacaacattgagcggcgctatcgggagacacagagcgactccatgaagcgtgagctggag
gacgtcatggcgcagcagccctgccccgcctgcgaaggaaaacgtctgcggaaggaggcg
ctggccgttaccgtgggggggctgagcatctatgattttacgcagatgtccgtggtggat
gaactggaatgggtaaaccgcctgacgctgacgcagcaacagatgttgattgccgaccgt
atcctcaaggagatcagaaaccggctgggctttttgcagtccgtgggcctcgggtacctg
acgctctcccgcagtgccgggactctctccggtggcgagagccagcgcatccggctggcc
actcagatcgggtcctccctgatgggggttttgtatattctggacgagccttccatcggc
ctgcaccagagggacaacgacaaacttctatcgacgctgaagcgcctgcgggaccttgga
aatacgctgctggtggtggagcacgacgaggacaccatgcgcgcggcggactacctcatc
gatgtgggccccggcgcgggaatccacgggggcgagatcgtggccgccggtacgccggaa
gaggttatggccaatcccaaatccctgaccgggcagtacctttccggcaagagaaagatc
gccgtcccggagattaggcgaaagggaagcggtaactttttaaaggtcatcggcgctgcg
gagaacaacctgaaaaacgtggacgtggcgattccgctgggaaccttcacctgcgttacc
ggcgtgtccggctccgggaaatcctcccttgtaaatgaaatcctctttaaaaagctgggt
gcggagctgatgcgcatgaagacccggcccggcaggtgcaagcgcatcgagggactggaa
tttctcgacaaagtggtggacattgaccaaagccccatcggtcggacgccccgcagcaat
cctgccacctatacgggccttttcaatgacatccgggacctgtttgccgccacgcaggag
gccaggagccggggctacggcccgggccggttcagcttcaacgtccggggcgggcggtgc
gaggcctgctccggcgatggcctcattaagattgagatgcacttcctgccggatatcttt
gtcccctgtgaggtctgcaagggcgcgcggtataaccgggagactctggaggtccgctac
aagggcaaaaacattgcccaggttctggacatgacggtggaggaggcaacggagttcttc
tccgcccttcccaagattttcaacaagctgcaaacgctctgcgacgtgggccttgggtat
gtgaagctgggccagtcctccacggagctgtccggcggcgaggcccaacgggtgaagctg
gccacggagctgagcaagatcgccacgggccgcacgatctatattttagacgagcccacc
accggactgcacagcgaggatgtgcgcaggcttctggaagttcttcaaaagctggtggag
ggcgggaacaccgttttggtgatcgaacataatctggacgtcatcaaatgcgccgactat
ctcatcgacttgggccctgagggcggtgacggcggcggaaacatcgtctgtaccggcaca
ccggaggaggtggccgcctgcgcggagagctttaccgggcagtatctgaaaaagatgctc
cgctga
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