Oscillibacter valericigenes: OBV_23500
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Entry
OBV_23500 CDS
T01636
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ova
Oscillibacter valericigenes
Pathway
ova00550
Peptidoglycan biosynthesis
ova01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OBV_23500 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ova01002
]
OBV_23500 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ova01011
]
OBV_23500 (dacB)
Enzymes [BR:
ova01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OBV_23500 (dacB)
Peptidases and inhibitors [BR:
ova01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
OBV_23500 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ova01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
OBV_23500 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Peptidase_S13
Beta-lactamase
Transpeptidase
SIS
Motif
Other DBs
NCBI-ProteinID:
BAK99548
LinkDB
All DBs
Position
complement(2228816..2229928)
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AA seq
370 aa
AA seq
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METRFKRFLTLLCAILILYSVFPCRVCAISTSATSAVLMDVDSGRVLYAQNENAKMLIAS
TTKIMTALVALENGDLNSTVKVTAEAANTEGSSMYLKTGEKLTLETLLYGLMLCSGNDAA
VAVAQGVAGSTDKFVKLMNQKAKELGMTHTSFANPNGLDDEKHYSTAKDMAVLACAAMNN
ETFARIVSTRTVTVGGRTLTNHNKLLSYVDGCIGLKTGYTKAAGRTLVSCAQRNGQRLVA
VTLQDGNDWADHAALYDYGFSAYPAQRAMTIGEAVGTLAVTGGLSSSVPLVAANSFSWPL
AQGEKLEVRFELPESLRAPVAAGTSAGQAVFSLSGKEVGRVELLCGSDTLLAIQPPTSLL
RRLRILMQGG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgcttcaaaagattcctgacgttgctttgcgctattttaatactgtacagt
gttttcccctgccgggtgtgtgccatcagtacttccgccacatccgccgtgctgatggat
gtggattccgggcgggtgctgtacgcccagaacgaaaacgccaaaatgctgattgccagc
accacgaagatcatgaccgcgctggtggctctggaaaacggggacttaaacagcaccgta
aaggtcacggcggaggccgcgaacacggagggctcctccatgtatctgaagaccggggag
aagctgacgctggagaccttgctgtatgggctgatgctctgctccggaaatgatgcggcg
gtggccgtggcccagggtgtggcaggcagtacggacaagttcgtgaagctgatgaatcaa
aaggcgaaggagctgggtatgacgcatacctcctttgcaaaccccaatggtctggacgat
gaaaagcattactccaccgccaaggacatggcggttttggcttgcgccgccatgaataat
gagacgtttgcccgtattgtatccacccgtaccgtcaccgtgggtgggcggacgctgacc
aaccacaacaagctgctctcttatgtggatggctgcattgggctgaagaccggctatacg
aaggcggcgggccgcacgctggtctcctgcgcgcagcggaacgggcagcggttggtggcg
gtgaccttacaggacggtaacgactgggcggatcacgccgcactgtatgactacggtttt
tctgcctatcccgctcagcgggccatgaccatcggtgaggcggtggggacgctggcagtg
actggcggattgagttcctcggttccgctggtggcggcgaacagcttttcctggccgctg
gcgcaaggggaaaaactggaggttcgattcgaactgccggagagccttcgggccccggtg
gcggcgggaacttcggcgggacaagcagttttcagcctgagcggcaaagaagtcgggcgg
gtggaattactgtgcggcagcgatacgctgctggcgattcagccccccacaagccttctt
cgccgcctccgtatactgatgcagggaggataa
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