Opisthorchis viverrini (Southeast Asian liver fluke): T265_11255
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Entry
T265_11255 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
T265_11255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_11255
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
T265_11255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
20325423
NCBI-ProteinID:
XP_009176126
UniProt:
A0A074ZA56
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MQRSLLNFFSRASKTSLQTLDQVPNEVNVTESAIQPMGCGQVDFEEDLPMKFSRSGRKRS
IIESSDEEDSSCVVNTASKENFKPSFNRNKESRLSGFSCSSPKLPRTSITSDSDTLSRSL
NETIGDNTVEASDVNGSFIDEESVPWEHLKLPFLKKENLMDSARRKPNHPDYDPRTLFVP
GDFLAKQSPGMRQWWELKSKYADAILFFKVGKFYEMYHMDAAVGVEHLGLVYMKGSFAHC
GFPEIAFSRMSEQLVKKGYKVARVEQTESVDAMTERTRGRPGSEKVVKREVCQLSTPGTC
TTSMRTELSYSSNPALSDSEDGAVSTEALDTAPESFLLAIGEETSNESSEHVFGVALLNA
TNGTILMGQFCDDRHCGRLRTLISHYFPSQILVEKGSVGHSIKLLLKTCLSGVPIEYLTR
GKQFWSAKETIIELETAGYFSSAEQGKQQCNSDSRRDPLFPGKENWPGTLVRMLSEDDPL
GRSVKADYDLAMSCLGAIIYYLRYCLIDRQVMSLGLIDLYIPPDCLQIATTTGSGQVFYS
KQTSLVLDSITLANLDILHNSVTGTREGTLLERLDTCCTPFGRRLLRQWLTAPPCNPKLI
RARQDAVDNLIDIGGQLNSIKLSLRRLPDFERLLTKIHLVGSKKNEKNHPDARAILFEEV
QYSRRNIVDFLATLHGFEVACEIITQLGALSLCAPLLRALTKLEADGGQFPDLRPKIAFF
LNAFDAEKAKRDGRITPEPGVDEDYDEAVGEIQTINSELENYLIACGKLLGIRLAYWGTG
RNRFQLEVPDCAVSRVPRDWQLVSQRKGVKRYRTDETTELLGRLTAAEDRKDASLRNILQ
TIFASFSDHFTLWHSAMRCLAEFDCLLALANYSSNASDVTCRPEFIDLKNDSQQPFLEIV
DGLHPCLINTFSGGDLIPNDTRLGIIDSNDPGNVPLTLLVTGPNMGGKSTLMRQTALLVI
LAHLGCRIPASFCRLTPVDRVFSRLGASDRLLAGESTFMVELAETAAILRHCTLHSLVLM
DELGRGTSTHDGAALASAVLHYLANPRADQLIGQGPRTLFSTHYHSLVDEVALSGQQSEV
ARIGLGHMACMVEEQSEAEAGLENITFLYKFIPGACPKSYGFNAARLAHLPDEVIQLGLA
KAKEFERTSATFACLRKLLSGTMSWADAVDWKKKLHGFD
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggtcattgctgaacttcttttctcgtgcttccaaaacatctctacagactctt
gatcaagtgccaaatgaagtcaacgttaccgaaagtgccattcagccgatggggtgcgga
caagtggacttcgaggaggatctaccaatgaagttctcacgttctggacgtaaaagatct
ataatagagtccagcgacgaagaggactcatcgtgcgttgtaaacacagcatctaaggaa
aattttaaaccctcgttcaaccggaataaagaatcacgtttatcgggattttcttgcagc
tccccgaaactgccacggacatcaattacgagtgactcagatacgctttccaggagcctg
aatgagacaattggggataatactgttgaggcctcggatgttaatggttcgttcattgac
gaggagtccgtgccctgggagcatttgaagctaccgtttctaaagaaagaaaatcttatg
gactctgctagacggaaacccaatcatccagattatgatccacgaaccttgttcgtgcct
ggagattttctggcgaaacagtctcccggtatgcggcagtggtgggaactgaaatcaaag
tatgctgacgcgattttgtttttcaaagttgggaaattttatgaaatgtaccatatggac
gctgcggtgggggtcgaacacttgggattagtctacatgaagggttcattcgctcattgc
ggatttcccgaaatcgccttctcgaggatgtccgaacaattggttaaaaagggctacaag
gttgctagggttgagcagacggagtccgtagacgccatgactgagcgtactcggggaagg
ccgggatcggagaaggttgtgaagcgagaagtttgccagctttcaactccaggaacgtgt
accacaagtatgcgaactgagttgtcgtactcctccaatccggcgttatcggattccgaa
gacggtgccgtatcaacagaggcacttgacactgccccggaaagctttcttttggccata
ggggaggagacatccaacgaaagcagcgagcacgtatttggggtggccttgttgaatgca
actaatggtactattctgatggggcaattctgtgacgaccggcactgtgggaggcttcga
acattaatctcacactacttccccagtcagattctcgtggaaaagggttctgtcggtcat
tcaatcaaactcttattgaagacttgtttatctggcgttccgattgagtatttgacgcgc
ggaaagcagttttggtccgcaaaggaaactatcatcgaactagagacggctggttatttt
tcatccgcggaacagggcaagcaacaatgcaactcggacagtcgtcgtgatccgttattt
ccaggcaaggaaaattggcccggaacattagttagaatgctcagtgaagatgatccattg
ggtcgttcagttaaagcagattacgacctcgcgatgagttgcctgggtgcgatcatctac
tatctccgctactgtctcatcgatcgacaagttatgtccttgggtctgattgatctgtac
atacccccggattgtcttcaaatcgccaccacaaccggctccggtcaagtcttctattca
aaacaaacgtcgctggttctggatagcatcactctggctaatttggatatcttgcacaac
agtgtgacagggacacgtgaagggacgctcctggaacgtttggatacatgttgcacacct
ttcggtcgccgacttctgcgccagtggctgactgcccctccatgcaaccccaaattgatt
cgggcgcgccaagatgccgtggacaacttgattgatattgggggccagctgaattcgata
aagctgagtcttcggcgccttcccgattttgagcgcctgctcacaaagatccacctcgtt
ggatcaaagaaaaatgaaaagaatcatcccgatgctcgagcgatactgttcgaagaagta
cagtactcacgaaggaacattgttgactttttggctaccctacacggcttcgaagtagct
tgtgaaatcataacccagctaggagcgttatctctttgtgcacccctcctacgggccttg
acgaaactagaagctgatggtggacagtttcctgacttgaggccgaaaatcgcctttttc
ttgaacgcctttgacgcggaaaaggctaagcgagacggtcgaatcactcctgaacctgga
gtggacgaggattatgacgaggctgtcggagaaatacagactatcaattcggaattggag
aactacctcattgcctgtgggaagctacttggtattcggctcgcctactggggtaccggt
cgcaatcgattccagttggaggtacccgattgtgctgtttcgcgtgttccaagggattgg
caattggtctcacaacgtaaaggtgtgaagcgatatcgtacagatgaaaccacagagttg
ttaggacgtcttactgcagcggaagatcgcaaggatgctagtttacgcaatatcctgcag
acaatatttgcatcattcagtgaccatttcaccctatggcattctgcaatgcgatgtttg
gctgaattcgactgcctacttgcactggcaaactacagttcgaacgcatctgacgtgact
tgtcgcccagagtttatcgacctcaaaaacgactctcagcagccgttcctggagattgtc
gatggtcttcatccatgcttaatcaacacattcagtggcggtgaccttattccaaacgat
acacgccttggtatcatcgactcaaacgatcctggcaacgtccctctcaccttacttgtc
actggaccgaatatgggtggtaaatccactctgatgcgtcaaaccgccttgttggttatc
ctagcacatctgggttgtcggattcctgcatcattttgccggctcactcccgtagatcgg
gtcttttcgcggctcggtgctagtgaccgactactagccggagaaagcacattcatggtg
gaactggctgaaaccgccgctattctccgacattgcactctccatagtcttgttttgatg
gacgagttgggacgcggtacgtcaacgcatgacggggctgctttggcgagtgctgtgtta
cattacctagccaatccaagagccgatcagctgataggacaaggacctcgcactcttttc
tccacgcattaccatagtctggtcgatgaggttgcactcagcggtcaacagtctgaagta
gctcgcattggtttaggtcatatggcctgcatggtggaagaacaatcggaagcggaagct
ggtctagagaatatcacgttcctgtataaattcattcccggagcctgccccaaaagctac
ggattcaacgctgctcggttggcacatctaccagatgaggtcattcaactgggactggcc
aaagcaaaggaattcgaacgcacctcagctacttttgcctgtctccgtaaactactgagc
ggaacgatgagctgggcggacgcagtggattggaagaagaagctgcatggctttgattag
DBGET
integrated database retrieval system
