Odocoileus virginianus (white-tailed deer): 110125878
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Entry
110125878 CDS
T10722
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03082
ATP-dependent chromatin remodeling
ovr04714
Thermogenesis
ovr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110125878 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110125878 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110125878 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110125878 (SMARCD2)
03036 Chromosome and associated proteins [BR:
ovr03036
]
110125878 (SMARCD2)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110125878 (SMARCD2)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110125878 (SMARCD2)
PBAF complex
110125878 (SMARCD2)
GBAF(ncBAF) complex
110125878 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
110125878
NCBI-ProteinID:
XP_020730880
UniProt:
A0A6J0W3G9
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All DBs
Position
17:41368485..41378138
Genome browser
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGPTGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcg
gttgccgcggccctgggagcgccgcctccgccagcgggacccggcatgctgcccggaccg
gcgctcagggggcccgggccggctggaggcgtggggggccccggggccgccgccttccgc
cccatgggccccgcgggcccggcggcgcagtaccagcggcctggcatgtccccagggagc
cggatgcccatggctggcttgcaggtgggaccccctgccggctccccctttggcacagct
gctccactccgacctggcatgccacccaccatgatggacccattccgaaaacgcctgctt
gtgcctcaggcccagcccccgatgcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaagttctacctcagcgaattcgggagcttgtcccagagtctcaggcgtacatg
gacctcttggcttttgaacggaagctggaccagaccattgctcgaaagcggatggagatc
caggaggccatcaaaaagcctctgacgcaaaaacgaaagctgcggatctatatttccaat
acattcagtcccagcaaggcagaaggtgacagtgcaggacccacagggacccctggagga
acccccgcaggggacaaggtggcttcctgggaactccgagtagagggaaaactgctggac
gaccctagcaaacagaagaggaagttttcttccttctttaagagcctcgtcattgagctg
gacaaggaactgtacgggcctgacaaccacctggtggagtggcaccggatgcccaccacc
caggagacagacggcttccaggtgaaacggcctggagacctgaacgtcaagtgcaccctc
ctgctcatgctggatcatcagcccccccagtacaagctggacccccgcctggcgaggctg
ctgggggtgcacactcagacgagggccgccatcatgcaggccctatggctgtacatcaaa
cacaaccagctgcaggacggccacgagcgcgagtacatcaactgcaaccgctacttccgc
cagatcttcagctgcggccgactccgtttctctgagattcccatgaagctggcggggttg
ctgcagcatccagaccccattgtcatcaaccacgtcatcagcgtggacccgaacgaccag
aagaagacagcctgttacgacattgacgtggaggtggatgacccactcaaggcccagatg
agcaattttctggcctctaccaccaatcagcaggagatcgcctctcttgatgtcaagatc
cacgagaccatcgagtccatcaaccagctgaagactcagagggatttcatgctcagtttt
agcactgacccccaggacttcatccaggagtggctccgttcccagcgccgggacctcaag
atcatcactgatgtgattgggaacccggaggaggagaggcgagcagctttctaccaccag
ccctgggcccaggaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaatccgcctgacctaa
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