Odocoileus virginianus (white-tailed deer): 110136814
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Entry
110136814 CDS
T10722
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03013
Nucleocytoplasmic transport
ovr05014
Amyotrophic lateral sclerosis
ovr05200
Pathways in cancer
ovr05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110136814 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110136814 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
110136814 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110136814 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110136814 (TPR)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110136814 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
YwqH-like
Imm70
Motif
Other DBs
NCBI-GeneID:
110136814
NCBI-ProteinID:
XP_070330038
UniProt:
A0ABM4IQF0
LinkDB
All DBs
Position
11:12819468..12879050
Genome browser
AA seq
2436 aa
AA seq
DB search
MPSSGSVSRNRQRGRPMASRSFDGSHRGSLRRAGARELPGEEVEAAAQPSGSSRSSPLFS
VSAASTAAAAVPGPVDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEINGLKGRHE
KFKVESEQHYFEIEKRLSHSQERLVNETRECQNLQLELEKLSSQLKALTEKNKELEVAQD
RSIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDFKRLNEKLKESNATKGELQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKC
NLENKKEEVSRMEEQMNGLKASNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDQLHRLLKSTGEASKGFQEHIIEVEESKDRMEKEMLE
KIRKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEDTDKANKHSSVLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKISELQAKLE
NALTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLVSTPKR
SSTSQTASTPAPVIEPAEAIEAKAALKQLQEIFENYKTEKADNEKMQNEQLEKLQEQVTD
LRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQD
LRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGIL
ERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNL
HLNTKELLKNAQKEIATLKQHLSNMEVQLASQSSQRTGKGQPSNKEDMDDLLSQLRQAEE
QVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEK
KLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLNSVQNEVQEALQRAGTALSNEQHARR
DCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETAQKAESQLLE
CKASWEERERMLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVSSMKEGVQGPLNVSL
SEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAER
EKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILP
LQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTK
RIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKENIQKELDAKIIDIQE
KVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLSQA
EAKSKSLENQVENLQKTLSEKEVEARSLQEQTLELQSELARLRQDLQDRTTQEEQLRQQI
TEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQY
EGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASMSDPPT
ANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQ
EAMQSEGPVEHVPVFGSTSGSVRSTSPNIQPSIPQPILTVQQQTQATAFVQPTQQSHPQI
EPTNQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASDQI
ADDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYTQDSQDSIGEGVTQGDYTPM
EDSEETSQSLQIELGPLQSDQQTASSQDGQGKGDDVIVIDSDDEEEEEDENDGEHEDYEE
DEDDDEDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGES
NQRAADSQNSGEGNTGTAESSFSQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTI
HAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTD
GFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESG
GRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGDEVF
VEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVR
LQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtctagaaaccgccaaagaggacgacccatggcatcccga
agctttgacgggtcccaccgcgggagtctccggcgggcgggcgcgcgcgagctaccgggt
gaggaggtcgaggcggccgcccagccttctgggtcctctaggtcttcgcctttattttcc
gtttctgccgcgtcgaccgctgctgccgcggtccccggcccagtcgacatggcggcggtg
ttgcagcaggtcctggagcgcacggagctgaacaagctgcctaagtccgtccagaacaaa
cttgagaagttccttgctgaccagcagtccgagatcaacggcctgaagggacggcacgag
aaatttaaggtggagagcgaacaacattactttgagattgagaagagactgtcccacagt
caggagagacttgtgaatgaaacccgagagtgtcagaacttgcagcttgagctagagaag
ctcagcagtcaactgaaggcacttaccgagaaaaacaaggaacttgaagttgctcaggat
cgcagtattgccattcagagccagtttacacggacaaaggaagaattggaagctgagaaa
agagacttgattagaaccaatgagagactgtctcaagaacttgaatatttaacagaggat
tttaaacgtctaaatgaaaaacttaaggaaagcaatgcaacaaagggtgagcttcagtta
aaactggatgaacttcaagcttctgatgtttctgttaagtatcgagaaaagcgcttggag
caagaaaaggaattattacataatcagaatacttggctcaatacagagttgaaaaccaaa
actgatgaacttctggctctcggcagagaaaaaggaaatgaaattctagagcttaaatgt
aatcttgaaaacaaaaaagaggaggtttctagaatggaagaacagatgaatggcctgaaa
gcatcaaatgagaatcttcaaaagcatgtagaggatctgttgaccaaactgaaagaggcc
aaggaacagcaggctagtatggaagagaaatttcacaatgaattaaatgctcacataaaa
ctctctaacctttacaagagtgctgctgatgattcagaggcaaagagcaatgaactgacc
cgagcagtggaccagctacacaggcttttgaagtcaactggagaagccagtaaaggattt
caagaacatatcatagaggtggaagaatctaaagatcgaatggaaaaagaaatgcttgag
aaaataaggaaattagagaaggaattagagaatgcaaatgacctgctctctgccacaaaa
cgtaaaggggccatcttatctgaagaagagcttgcagccatgtctcctacggcagcagct
gtagccaagatagtgaagcctggcatgaagttaactgagctgtataatgcttatgtggaa
actcaggatcagctgcttttggagaaactagaaaacaaaagaattaataagtatctagat
gaaatagtgaaagaagttgaagccaaagcgccaattttgaaacgccaacgtgaggagtat
gagcgtgcacagaaagctgtggcaagtttatctgttaagcttgaacaagctatgaaggag
attcagcgattgcaggaggacacagataaagccaataaacattcatctgtgcttgaaaga
gacaaccaaagaatggaagtacaaataaaagatctttcacaacagattagagtgcttctg
atggaacttgaagaagcgaggggtaaccatgtaatccgtgatgaggaagtaagctctgct
gatataagtagttcatctgaagtaatatcacagcatctggtatcttatagaaacattgaa
gagcttcaacagcaaaaccagcgtctcttagtggcccttcgggaacttggggaaaccaga
gaaagagaagaacaagaaacaacttcatctaaaatttctgagcttcaggccaaacttgag
aacgccctcactgaattggaacaactccgtgaatcacggcaacatcaaatgcagcttgtt
gattctatagttcgtcagcgtgatatgtaccgaattttgttgtcacagacaacaggagtt
gccattcctttacaggcttcaagcttagatgatatttctcttgtgtcaactccaaaacgt
tcaagtacatcacagactgcttccactcctgctccagtgattgagccagcagaggctata
gaagctaaggctgcacttaaacagctgcaggaaatttttgagaactacaaaacagaaaag
gcagataatgaaaaaatgcagaatgagcagcttgagaaacttcaggagcaagtcacagat
ttgcgatcacaaaatacaaaaatctctacccagctagattttgcttctaaacgttatgaa
atgcttcaagataatgtagaaggataccgtcgagaaataacatccctacatgagagaaat
cagaaactcactgcaacaactcagaagcaggaacagatcatcaacacaatgactcaggat
ttgagaggagctaacgaaaagctagctgttgcagaagtaagagcagaaaacctgaaaaaa
gaaaaggaaatgcttaaattgtcagaagtccgtctttctcagcaaagagaatctttgttg
gccgagcagagagggcaaaacttactgcttactaatctgcagacaattcagggaatatta
gagcgatctgaaacagaaaccaaacaaaggcttagtagccagatagaaaaactggaacat
gaaatatctcatctaaagaagaagttggagaatgaggtggaacagagacatacacttact
agaaatctggatgttcagcttttagatacaaagagacagctggatactgagacaaatctt
catcttaacacaaaagaactgttaaaaaatgctcaaaaggaaattgctacattgaaacag
cacctcagtaatatggaagtccaacttgcttctcagtcttcacagagaactggtaaaggt
cagcctagcaacaaagaagatatggatgaccttctgagccagctaaggcaggcagaagaa
caggtgaatgacttgaaggaaagactcaaaacaagcactagtaatgtggaacagtatcgt
gcaatggttactagtttggaggaatccctcaacaaagaaaaacaggtgacagaagaagta
cgtaagaacattgaagttcgcttaaaagagtcagccgaatttcagacacagctggaaaag
aagttgatggaagtagagaaggaaaaacaggaacttcaggatgacaagagaaaagccata
gagagcatggaacaacagttatctgagttaaagaaaacactcaatagtgttcagaatgaa
gtacaagaagctcttcagagagcaggcacagctttgagtaatgaacagcacgccagacgg
gactgtcaggagcaagctaaaatagctgtggaagctcagaataagtatgagagagaattg
atgctacatgctgctgatgttgaagctctccaagctgccaaggaacaggtttccaaaatg
gcatcagtgcgtcagcatttggaagaaacagcccaaaaagcagaatcacagttgttggaa
tgtaaagcatcttgggaagagagagagagaatgttaaaggatgaagtttctaaaagtgtg
tctcgctgtgaagatctagaaaaacaaaacaggttacttcatgatcagattgaaaaatta
agtgacaaagtcgtttcctcaatgaaggaaggtgtacaaggtccattgaatgtatctctc
agtgaagaaggaaaatcccaagaacaaattttagaaattctcagatttatacgacgagaa
aaagaaattgctgaaactagatttgaagtggctcaagttgagagcctgcgatatcgacaa
agggttgaacttttagaaagagagctgcaggaactgcaggatagcctaaatgctgaaagg
gagaaagttcaggtaactgcaaaaacaatggcccagcatgaggaactgatgaagaaaact
gaaacaatgaacgtagtcatggagaccaataagatgctgagagaagagaaggagaggctg
gaacaggatctacagcagatgcaagccaaggtcaggaaactggagttagatattttaccc
ttacaagaagcaaatgctgagctgagtgagaaaagcggtatgttgcaagcagagaagaag
ttattagaagaagatgtaaaacgttggaaagcacgtaaccagcatctagtgagtcagcag
aaagatccagatacagaagaatatcgtaagctgctttctgaaaaggaagttcacactaag
cgtattcagcaattgactgaagaaattggaagacttaaagctgaaattgcaagatcaaat
gcatctttgactaacaaccagaacttaatccagagtctaaaggaagatttaaataaagta
agaacagaaaaggaaaatatccagaaggagttagatgccaaaataattgatattcaagaa
aaggttaaaactattactcaagtcaagaaaattggacgtaggtacaagactcaatatgaa
gaacttaaagcacaacaggataaggtcatggagacttcagctcagtcttctggagaccat
caggagcagcacgtctcagttcaggaaatgcaagagctgaaagagaccctaagccaagca
gaagccaagtcaaagtcacttgagaatcaagtggagaacctgcagaagactttgtctgag
aaagaggtagaagcaagaagtctccaggaacagactttggagcttcaatctgaacttgca
cgacttcgtcaggaccttcaagatagaaccacacaggaagaacaacttcgacagcagata
actgaaaaggaagaaaagacaagaaaggccattgtagcagcaaaatcaaaaattgcacat
ttagctggtgtaaaagatcagctaactaaagaaaatgaagagcttaaacaaaggaatgga
gccttagatcagcagaaagatgaactggatgttcgtatgactgctcttaagtcccagtac
gaaggtcgaattagtcgcttggagagagaactcagggagcatcaagagagacaccttgag
cagagggacgagcctcaggaacctaccaataaggtcccagaacagcagagacagatcacg
ttgaaaacaactccagcttctggtgaaagaggaattgccagcatgtcagacccaccaaca
gccaatatcaagccgacccctgttgtgtctacaccgagtaaagtgacagctgcagctatg
gctgggaataagtcaacacccagagctagtatccgcccaatggttacacctgcaactgtc
acaaatcctactactaccccgacagccacggtgatgcccactacacaagtggagtcccag
gaagcaatgcagtcagaagggcctgtggaacatgttccagtttttggaagcacaagtgga
tctgttcgttctaccagtcctaacatccagccttctatccctcagcccattttaacagtt
cagcaacaaacacaggctacggcttttgtgcagcctactcaacagagtcaccctcagatt
gagcctacaaatcaagaactatccccaaacatagtggaggtggttcagagttcgccagtt
gagcggccttctacttccacagcagtatttggcactgtttcagctaccccaagttcttct
ttgccaaagcgtacacgtgaagaggaagaagatagcaccatagaagcatcagaccagatc
gctgatgatacagtggaaatgcctcttccaaagaagctgaaaagtgttacacctgtagga
actgaggaagaagttatggcagaagaaagtactgatggagaggtagagactcaagtatac
acccaggattctcaagattccattggagaaggagtcacccagggagattatacgccaatg
gaagacagtgaagaaacctctcaatctctacaaatagagcttggacctcttcagtcagat
cagcaaacagcttcatcccaagatggtcagggcaaaggagatgatgttattgtaattgac
agtgatgatgaagaggaggaggaggatgaaaatgatggggaacatgaggattatgaagaa
gatgaagacgatgatgaggatgatgaagatgacacagggatgggagatgagggtgaagat
agtaatgaaggcactggtagtgcagatggcaatgacggatatgaagctgatgatgctgag
ggtggtgacgggactgatccaggtacagaaacagaagaaagtatgggtggaggtgaaagt
aatcagagagcagctgattctcaaaacagtggtgaaggaaatactggtacagcagagtcc
tctttttcccaggagatatctagagaacagcagccatcatcagcatctgaaagacagacc
ccccgagcacctcagtcaccaagacgcccaccacacccgcttcccccaagactgaccatt
catgctccacctcaggagctggggccaccagttcagagaattcagatgactcgaaggcaa
tctgtaggacgtgggcttcagttgactccaggaataggtggcatgcagcagcattttttt
gatgatgaagatagaacagttccaagtaccccaactctcgtggtgccacatcgtactgat
gggtttgctgaagcaattcattccccacaggttgctggtgttcctagattccggtttggg
ccacctgaagatatgccacaaacaagttctagtcactctgatcttggccagcttgcttct
caaggaggtttgggaatgtatgaaacaccccttttcctagcacatgaagaggagtcgggt
ggccgaagtgttcctactactcctctacaagtagcagccccagtgaccgtatttactgag
agcaccacctccgatgcctcagagcatgcttctcagtctgttccaatggtgacaacatcc
actggtactttatccacaacaaatgaaacagcagcaggtgatgatggagatgaagtattt
gtggaggcagaatctgaaggtattagttcagaagcaggcctcgaaattgatagccagcag
gaagaagagcctgttcaggcttctgatgagtcagatcttccttccaccagccaggaccct
ccttccagttcttctgtagatactagcagtagtcagccgaagcctttcagacgagtaaga
cttcagacaacattgagacaaggtgtccgtggtcgccagtttaacagacagagaggtgtg
agccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
