Odocoileus virginianus (white-tailed deer): 110145851
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Entry
110145851 CDS
T10722
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type substrate 1 isoform X1
KO
K06551
signal-regulatory protein alpha/beta1/gamma
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04148
Efferocytosis
ovr04380
Osteoclast differentiation
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110145851
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
110145851
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110145851
04090 CD molecules [BR:
ovr04090
]
110145851
Cell adhesion molecules [BR:
ovr04515
]
Immunoglobulin superfamily
SIRP family
110145851
CD molecules [BR:
ovr04090
]
Proteins
110145851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
V-set
Ig_3
C2-set_2
ig
Ig_2
I-set
SIT
C2-set_3
DUF4577
Syndecan
Lmo2446-like_N
Alpha_GJ
CD34_antigen
MFS_1
PRIMA1
OSTbeta
Trp_oprn_chp
TMEM154
Motif
Other DBs
NCBI-GeneID:
110145851
NCBI-ProteinID:
XP_020761986
UniProt:
A0A6J0YLY0
LinkDB
All DBs
Position
9:47261751..47332680
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AA seq
510 aa
AA seq
DB search
MEPTRPAPGRLRPLLCLLLAASSAWTGAAGERELQVVQPERSVSVAAGETATLHCTLTSL
SPVGPIKWFRGTGPGRELIYSQKEAPFPRVTNVSDATKRNNMDFSIRISNITPADTGVYY
CVKFQKGEHGDVEFKSGPGTHLTVSAKPSPPMVSGPTVRATPEQTVSFTCTSHGFSPRNI
SLKWFKNGNELSASQTSVDPQKDNASYSINSTTKVLLAPGDVHSQVICEVAHVTLQGGPP
LRGTANLSETIRVPPTLEITGYPPAGNQVNVTCQVNKFYPQRLQLTWLENGNVSRTEPAS
TLVENKDGTFNHTSWFLVNSSAHREAVVLTCQVEHDGQPAVSKNHTLEVSAPQKDQDTGQ
TPGPNGNSWNSVFIVVGVVCALLVALLIVALCLLRIRQKKAKGSTSSTRLHEPEKNTRET
TQVQSLIQDNNDITYADLNLPKGKKSTPKANEPNNHTEYASIQARPPPVSEDTLTYADLD
MVHLNRTPKQPAPKPEPSYSEYASVQVQRK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggagccaacccgcccggcccccggccgcctcaggccgctgctctgcctgctgcttgcc
gcgtccagcgcctggacaggagcggcaggtgagagggagctgcaggtggttcagcctgag
aggtcagtgtcagttgcagcaggagagacggccactctgcactgcaccctgacctccctg
agccccgtggggcccatcaagtggttcaggggaactgggccaggccgggagttgatctac
agtcaaaaagaagctcccttccccagagttacaaatgtttcagatgccacaaaaagaaac
aacatggacttttccatccgcatcagtaacatcaccccagcagacactggtgtctactac
tgtgtgaagttccagaaaggagaacatggtgacgtggagtttaagtctggaccaggcact
catctcactgtgagtgccaagccctctccgcccatggtatccggccctacagtgagggct
acacctgagcagacagtgagcttcacctgcacatcccacggcttctcccccagaaacatc
tccctgaaatggttcaaaaatggcaatgagctctcagcctcccagaccagcgtggaccca
cagaaagacaacgcttcctacagcatcaacagcacaactaaagtgctgctggccccaggg
gacgttcactcccaggtcatctgcgaggtggcccacgtcaccctgcaggggggccctcct
ctccgtgggactgccaacttgtctgagaccatccgagttccacccaccctggagattacc
ggataccccccagcggggaaccaggtgaacgtcacctgtcaggtgaacaagttctacccc
cagcgcctacagctgacctggttggagaacggaaacgtgtcccgaacagaaccggcctcg
accctcgtagagaacaaggatgggacctttaaccatacaagctggttcctggtaaactcc
tctgcccacagggaggctgtggtgctcacctgccaggtggagcatgacgggcagccggcg
gtctccaaaaaccataccctggaggtctctgctccccagaaggaccaggacacaggtcaa
acccctggcccgaatggcaacagctggaacagcgtcttcatcgtggtgggcgtggtgtgc
gccttgctggtggccctgctgatcgtagccctctgcctcctccgaatcagacagaagaaa
gccaagggctccacttcttctacaaggctgcacgagcccgagaagaacaccagagaaaca
actcaggtacagtccttgatccaagacaacaatgacatcacatatgcagacctgaacctg
cccaaggggaagaagtcaacccccaaggccaatgaaccgaacaaccacacggagtatgcc
agcattcaggcccgcccgccacccgtatctgaggacaccctcacctatgctgacctggac
atggtccacctcaaccggacccccaagcaaccggcccccaagcctgagccatcctactcg
gagtatgccagtgttcaggtccagaggaagtga
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