Paenimyroides aestuarii: NPX36_08975
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Entry
NPX36_08975 CDS
T09513
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
paae
Paenimyroides aestuarii
Pathway
paae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NPX36_08975 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paae03019
]
NPX36_08975 (rny)
Messenger RNA biogenesis [BR:
paae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NPX36_08975 (rny)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UUV20498
UniProt:
A0ABY5NPM2
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Position
complement(1862857..1864422)
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AA seq
521 aa
AA seq
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METTIFIISAIIVGAVIGFAIAKYLEKNNASSIIKNAKNEAKGILKDARAEGETIKKDKI
LQAKEKFIELKSEHEQIILSRDKKIAEAEKRTRDKESQISNELNRAKKAADESEKSIKEY
EAKLQSLEKKQEETEKLHRIQVEKLEQIAGLTADEARLQLVESLKAEAKTQAMAYIQDTV
EEAKMTAQQEARKIIINTIQRVGTEEAIENCVSVFNIESDDVKGRIIGREGRNIRALEAA
TGVEIIVDDTPEAIILSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVAKTAKQIDEEI
IETGKRTVIDLGIHGLHPELIKMVGRMKYRSSYGQNLLHHSREVARLCGLMAAELGLNVK
LAKRAGLLHDIGKVPETESDLPHALLGMQLAEKHGEKPEVCNAIGAHHDEIEMNSLISPI
IQVCDAISGARPGARRQVLDSYIQRLKDLEDIAYGFGGIKNAYAIQAGRELRVIVDCEKV
SDELAANLSFQISHKIQTEMTYPGQVKVTVIRETRAVNIAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacaatatttattattagtgcaattatagttggtgccgtaattggttttgca
atagcaaaatatcttgaaaagaacaatgcatcctctataataaaaaatgcgaaaaacgaa
gccaagggcattttaaaagacgctcgtgccgaaggagaaaccattaaaaaagacaaaatc
cttcaagccaaagaaaagttcattgaattaaaatcagaacacgaacaaatcattttatcg
cgcgataaaaaaatagccgaagccgaaaaaagaacacgcgataaagaatcacaaatttct
aacgaattaaatcgtgctaaaaaagctgccgatgaaagcgaaaaaagcatcaaagaatac
gaagccaaattgcaatcgttagaaaaaaaacaagaagaaacagaaaaactacaccgcatt
caggttgaaaaattggaacaaattgccggtttaacagcagatgaagcccgattgcagtta
gtagaaagcttgaaagccgaagcaaaaactcaggcaatggcatatattcaagacacggtg
gaagaagccaagatgactgctcagcaagaagctcgaaaaatcattatcaataccattcaa
cgcgttggaactgaagaagcaattgaaaactgtgtgtcggttttcaatatagaatcagac
gatgtgaaaggacgtattattggtcgtgaaggtagaaatattcgggctttagaagctgca
acaggtgttgaaatcattgtagatgacacgcccgaagcaattatcttgtcatgttttgat
ccggtgagaagagaaattgcccgattgtcgctacatcgtttggtgacagatgggcgtatt
caccctgcacgaattgaagaagttgttgccaagacagccaaacagatcgatgaagaaatt
attgaaaccggaaaacgtaccgttattgatttaggtattcatggattgcatccagaatta
ataaaaatggtaggccgcatgaaataccgttcctcttacggacaaaacctattgcaccac
tcccgcgaagttgccagactgtgtggattaatggctgctgagttgggattaaacgtaaaa
ttagctaaacgcgctggtttattacacgatattggtaaagtgccagaaacagaaagcgat
ttaccacacgcattattaggtatgcaattggcagaaaagcacggtgaaaaaccagaagtt
tgtaatgctattggtgcacaccacgacgaaattgaaatgaattcattaatatccccaatc
attcaagtatgtgatgctatttctggtgcgcgcccaggtgctcgccgacaagttttagat
tcttacattcaacgcttaaaagaccttgaagatattgcatatggctttggtggaattaaa
aacgcatacgcaattcaagctggtagagaattgcgcgtgattgtagattgtgaaaaagta
tccgacgaattggctgctaatttatctttccaaatttcgcataaaattcaaactgaaatg
acctatcccggacaagtaaaagttacagtaattagggaaacaagagcagtaaacatcgct
aaataa
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